| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 353,067 | A→G | intergenic (+34/+84) | hisF → / ← cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 353,067 | 0 | A | G | 100.0% | 43.3 / NA | 15 | intergenic (+34/+84) | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (7/8); total (7/8) | |||||||||||
CAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCC > NC_002947/352937‑353208 | cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCca < 7:126194/147‑1 (MQ=255) gcgcGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAg < 3:38029/148‑1 (MQ=255) cggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTTGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTgaga < 5:49288/147‑1 (MQ=255) cAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATctct > 6:80595/1‑148 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGAGCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCtgt < 1:131109/148‑1 (MQ=255) ggAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCcgcgca > 7:127238/1‑146 (MQ=255) ggAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGGTTGCTGAGATATCTGTGGGAGCGGGCGTGCCCGCGAAGGGCcgcgca > 6:139470/1‑146 (MQ=255) cATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCCCTCCCACACGTGTGGTGAGAAGTCTGTGGGAGCGGGCCTGCCCGCGAACGGCCCAGAAGCGGCCCCAATTGc > 8:83439/1‑147 (MQ=37) tCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCCCCCCCCCACCCACAGGTTTGCTGAGATGTGTGTGGGGGCGGGCGTGCCCCCGCAGGGCCGCGCAGCGGCCCCAAATGGGTAAACCCTGGGTGTTGCCGagcag > 2:56940/1‑148 (MQ=255) aCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACCCCCGCACCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGCAGGGCCCCGAAGCGGCCCCCATTTCTTCACCCCTGGTTATTGGCGAGCAGCGCGTGGTAAAg > 2:55754/1‑146 (MQ=37) cGGGGCTGCTTTGCCGCCCTGCGCGGGCCCGCCCGCGCCCACCGGTTTGCTGAGAGCGCTGGGGGAGCGGGCGGGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg < 1:56940/148‑1 (MQ=38) gggCTGCTTTGCAGCCCTTGGCGGGCACGCCCGCTCCCACAGGTTTGCTTAGAGCTCTGGGGGAGCGGGCTTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGt < 2:52073/148‑1 (MQ=38) ctgctTTGCAGCCCGGCGCGGGCACGCCCGCTCCCACAGGTTTGCTGATATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATc < 4:12395/148‑1 (MQ=39) tgctTTGCAGCCCTTCGCGGGCCCGCCCGCTCCCCCAGGGTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTGCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATcc < 3:22482/148‑1 (MQ=38) cTTCGCGGGCACGCCCCCTCCCACAGGTTTGCGGAGATATCTGTGGGAGCGGGCGTGCCCGCGCAGGGCCCCGCAGCGGCCCCAATTGCGTCAACCGTGGTTGTTGGCGAGCCGCGCGTGGGAAAGCTCGGTGTACCCCCGTATcccc > 2:56470/1‑148 (MQ=25) | CAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCC > NC_002947/352937‑353208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |