| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 307,866 | +C | intergenic (+881/‑988) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 307,865 | 1 | . | C | 98.6% | 248.9 / ‑3.4 | 72 | intergenic (+880/‑989) | hslO/PP_0254 | molecular chaperone HslO/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (36/35); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
CCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACT > NC_002947/307721‑308008 | ccATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAG‑GGta < 1:432621/149‑2 (MQ=255) aTGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAG‑ccgtta < 3:277036/149‑6 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGAt < 5:381827/147‑1 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCg > 8:162598/1‑149 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCg > 2:45912/1‑149 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACCGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATc < 1:32809/148‑1 (MQ=255) tGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGt < 1:256858/149‑1 (MQ=255) tGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGt < 2:245381/149‑1 (MQ=255) cAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTg < 3:22981/148‑1 (MQ=255) aGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTgac < 6:128321/149‑1 (MQ=255) ctgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTAc < 6:343979/126‑1 (MQ=255) ctgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTAc > 5:343979/1‑126 (MQ=255) ctgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACgg < 3:365998/149‑1 (MQ=255) ccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGt < 4:409661/147‑1 (MQ=255) cggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAGAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTg > 1:108402/1‑149 (MQ=255) ggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTggg < 8:145880/149‑1 (MQ=255) ggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTggg < 8:261326/149‑1 (MQ=255) gctggcgATTTACTGCCGATGCACTGCGCGGCCAACATCGGCGTAGA‑ATGGGATGTGTCCGTGGTCTTCGGCCTGTCCGGCAATGGCAAGACTACCCTTTCGGTCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTggg < 1:94590/149‑1 (MQ=255) gctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTgggg > 3:200537/1‑149 (MQ=255) ctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGc < 7:423621/149‑1 (MQ=255) gATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGC‑CTGACGAAAGCCGTTACCTGATCGGTCACGACGAGCACGGTTGGGGCGAAgg > 5:156911/1‑149 (MQ=255) cTGCCTATGCACTGAGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTg < 8:79101/148‑1 (MQ=255) ccTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTc < 3:1714/147‑1 (MQ=255) cTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTc < 1:45912/149‑1 (MQ=255) cACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑At > 8:42319/1‑149 (MQ=255) aCTGCGCGGCCAACATCGGCGAAGA‑AGGGGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATg > 1:259955/1‑149 (MQ=255) aCTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATg > 2:48079/1‑149 (MQ=255) cTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATg > 2:329341/1‑148 (MQ=255) cTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGGGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATg > 8:267484/1‑148 (MQ=255) ggCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAggcg > 8:35490/1‑149 (MQ=255) gCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAggcgg < 1:319376/149‑1 (MQ=255) aaCATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGgctg > 7:282679/1‑149 (MQ=255) aaCATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTACGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGgctg > 7:290952/1‑149 (MQ=255) gCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGcc < 1:252863/149‑1 (MQ=255) gCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGcc < 2:108402/149‑1 (MQ=255) gCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGc > 2:41377/1‑148 (MQ=255) aga‑agGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCTGCTGCTACGCCAAGt < 2:259955/149‑1 (MQ=255) aga‑agGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGt < 7:162598/149‑1 (MQ=255) ggCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCa > 4:111346/1‑148 (MQ=255) gCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATc > 2:432371/1‑149 (MQ=255) aTGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGAc < 1:41377/149‑1 (MQ=255) aCCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTc > 6:201651/1‑149 (MQ=255) cTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCg < 1:48079/149‑1 (MQ=255) gTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCga < 7:35490/147‑1 (MQ=255) gTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGA‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCgag > 3:350795/1‑148 (MQ=255) gTTCTTCGGCCTGTCCGGCACTGGCAAGACAACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCgag > 1:36717/1‑148 (MQ=255) ttcttcGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCgag > 2:380057/1‑147 (MQ=255) ttcGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAgaagaa > 4:346771/1‑149 (MQ=255) ttcGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAgaagaa > 3:168547/1‑149 (MQ=255) tcGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAAc > 4:91780/1‑149 (MQ=255) cGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGTTCGGTGTCGACGAGCACGGGTGGGGCGAAGGCGTTGTCTTCAACTCTGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGagaag < 1:329341/146‑1 (MQ=255) gCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCg < 4:54788/81‑1 (MQ=255) gCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCg > 3:54788/1‑81 (MQ=255) gCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAg < 7:42319/149‑1 (MQ=255) ccTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAGGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGc < 4:200537/149‑1 (MQ=255) ccGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGt > 3:163522/1‑148 (MQ=255) ggCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCg < 8:34130/130‑1 (MQ=255) ggCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCg > 7:34130/1‑130 (MQ=255) ggCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGa > 1:193494/1‑148 (MQ=255) gCAAGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGaaa < 8:282679/149‑1 (MQ=255) aGACTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGcc < 3:111346/149‑1 (MQ=255) cTACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc < 6:939/149‑1 (MQ=255) tACCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATAGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc > 4:343488/1‑148 (MQ=255) aCCCTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc > 6:393682/1‑147 (MQ=255) cccTTTCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGATCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc < 7:17400/146‑1 (MQ=255) tttCGG‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGCGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTTCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCAc > 1:164127/1‑149 (MQ=255) gg‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGgcg > 5:248174/1‑149 (MQ=255) gg‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGCCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGgcg < 1:380057/149‑1 (MQ=255) g‑CTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGgcg > 6:291005/1‑148 (MQ=255) cTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGgcg > 6:91040/1‑147 (MQ=255) aCGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAg < 8:154658/147‑1 (MQ=255) cGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTAc > 1:36189/1‑149 (MQ=255) gAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACt > 3:57929/1‑149 (MQ=255) | CCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGA‑AGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGG‑CTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAAC‑ATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACT > NC_002947/307721‑308008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |