Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	169.4 / NA	51	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (27/24);  total (27/24)

TGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATCCA  >  NC_002947/6013746‑6014029                                                                                                                                            |                                                                                                                                                    tGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTACCACAGGTGCAGCACAGGGCTCGAACGCTGTTCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATTGc                                                                                                                                            >  4:124712/1‑149 (MQ=38) gggCCCGGGGGAAGGCGCTGGAAGGGGGGGGGGGCCGCTTCATCGAATAAACGCGAAACCGGCTTCGCGGGCACGCCCACTCCCACCGGTGCAGCCCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGc                                                                                                                                            <  2:238178/148‑1 (MQ=25)                cGCTGGAAGGTGGTGTGGCCCGCTTCATCGAATAAACGCGACACCTGCTGCGCGGGCACGCCCGCCCCCACAGGTGCAGCACAGGGCGCGAACGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATc                                                                                                                          <  5:280940/149‑1 (MQ=38)                   gggAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTgg                                                                                                                       <  1:429317/148‑1 (MQ=255)                             ggtggtCAGCTCCATCGAATCAACGCGACACCTGCTGCGCGGGCACGCCCGCTCCCACCGGTGCCGCACAGGGCTCTAACGCTGGGCCGTCCCTGTGGGAGCGGGCGTGCCCGCGATTGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAg                                                                                                             <  7:389398/148‑1 (MQ=37)                                                  aaCGCGACACCCGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCt                                                                                         <  8:252221/148‑1 (MQ=255)                                                            cTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttct                                                                              >  6:436422/1‑149 (MQ=255)                                                                   gcgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTTGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                       <  8:231312/149‑1 (MQ=255)                                                                    cgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAg                                                                      <  8:51674/149‑1 (MQ=255)                                                                         aCGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCCCCAACAAGCGCGGGTAAAGTTCTTCTTTAAGCCCCt                                                                 >  5:3039/1‑149 (MQ=255)                                                                           gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                               <  7:206236/149‑1 (MQ=255)                                                                           gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                               >  7:262832/1‑149 (MQ=255)                                                                           gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                               <  2:109582/149‑1 (MQ=255)                                                                           gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                               >  4:156681/1‑149 (MQ=255)                                                                           gCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                               >  4:75992/1‑149 (MQ=18)                                                                             ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCgg                                                             >  6:452782/1‑149 (MQ=255)                                                                               gCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCt                                                           >  2:284056/1‑149 (MQ=255)                                                                                  cccACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                             >  8:258342/1‑128 (MQ=18)                                                                                  cccACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                             <  7:258342/128‑1 (MQ=18)                                                                                   ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACTTAAGTTTTTTTGGGATAGCGCCCGCCCCGCCCACAACAAGCGCTGGTTAAGTTCTTATTTAAGCCCCTGCGGCTg                                                          >  1:144514/1‑149 (MQ=25)                                                                                   ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                         <  7:256234/147‑1 (MQ=255)                                                                                     acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                      >  1:1541/1‑148 (MQ=255)                                                                                     acaGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCAAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                      >  7:38431/1‑148 (MQ=21)                                                                                         gTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTg                                                 >  5:378088/1‑149 (MQ=255)                                                                                                acaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGc                                          <  8:262832/149‑1 (MQ=255)                                                                                                         gAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                                 >  4:249823/1‑149 (MQ=255)                                                                                                              cTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAgg                                    >  4:28723/1‑141 (MQ=255)                                                                                                              cTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAgg                                    <  3:28723/141‑1 (MQ=255)                                                                                                               tgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                              >  5:208111/1‑146 (MQ=255)                                                                                                               tgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                              <  6:208111/146‑1 (MQ=255)                                                                                                                 tgctgcaCCTGTGGGAGCGGGCGTGCCCGCAAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCAt                          <  8:38431/142‑1 (MQ=255)                                                                                                                   ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCTCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                        <  7:425394/148‑1 (MQ=255)                                                                                                                   ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAcc                       >  3:215374/1‑149 (MQ=255)                                                                                                                   ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAcc                       >  2:376422/1‑149 (MQ=255)                                                                                                                   ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                        <  6:3039/148‑1 (MQ=255)                                                                                                                   ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                        <  5:400526/148‑1 (MQ=255)                                                                                                                     gTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                      >  4:316624/1‑148 (MQ=255)                                                                                                                       aCCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTc                   >  7:187320/1‑149 (MQ=255)                                                                                                                           gtgGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCACCAACAAGCGCTGGTAAAGTTCTTCTTTAATCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCATCCGGc               >  7:228126/1‑149 (MQ=255)                                                                                                                           gtgGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGc               >  1:23768/1‑149 (MQ=255)                                                                                                                           gtgGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCAACCGCCCCAGGTGGCTTTCATACCCCTCCGGc               >  7:228132/1‑149 (MQ=255)                                                                                                                            tgGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcc              >  2:137604/1‑149 (MQ=255)                                                                                                                            tgGGAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcc              >  2:131818/1‑149 (MQ=255)                                                                                                                               gAGCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCg           >  3:117077/1‑149 (MQ=255)                                                                                                                                 gCGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGt         <  3:156681/149‑1 (MQ=255)                                                                                                                                  cGGGCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg        <  3:124712/149‑1 (MQ=255)                                                                                                                                   gggCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg        >  7:148016/1‑148 (MQ=255)                                                                                                                                    ggCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCa      <  5:436422/149‑1 (MQ=255)                                                                                                                                    ggCGTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCa      <  8:265033/149‑1 (MQ=255)                                                                                                                                       gTGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATcc   <  4:215374/149‑1 (MQ=255)                                                                                                                                        tGCCCGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATCCa  <  3:249823/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                    TGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAAC‑‑‑CCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATCCA  >  NC_002947/6013746‑6014029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑