| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,113,912 | Δ1 bp | 6.3% | coding (407/888 nt) | scpA ← | segregation and condensation protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,113,912 | 0 | T | . | 6.3% | 200.1 / 6.5 | 63 | coding (407/888 nt) | scpA | segregation and condensation protein A |
| Reads supporting (aligned to +/- strand): ref base T (25/34); new base . (2/2); total (27/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
GTACCTTGGCCTGCGGCGCTTCCAGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCCACATAGCCCATGTACTGCCGGGTGA > NC_002947/5113772‑5114056 | gTACCTTGGCCTGCGGCGCTTCCAGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACcctcctcctc > 4:275998/1‑148 (MQ=255) ccTTGGCCTGCGGCGCTTCCAGGCGCGGCACCACCACCTCGCGCCCGCCCCGTGGCAATTCGTCGATGCCCTCGGCGGCCGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTCGGTCACCctcctcctcctc > 6:238753/1‑148 (MQ=255) cTTGGCCTGCGGCGCTTCCAGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGa > 1:247286/1‑149 (MQ=255) gcgcTTCCAGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGaa < 2:317734/149‑1 (MQ=255) cAGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGCCGTCGGCGGAACGCGgca > 4:225048/1‑149 (MQ=255) aGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGgcag < 8:226585/149‑1 (MQ=255) gcgcGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGgcagca < 3:139117/149‑1 (MQ=255) gcgGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCATCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGgcagcag > 1:230025/1‑148 (MQ=255) accaccaccTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCg < 1:39941/149‑1 (MQ=255) ccaccaccTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCAC‑‑‑CCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGAc > 7:34177/1‑149 (MQ=255) ccaccaccTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCAC‑‑‑CCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGAc > 7:29307/1‑149 (MQ=255) accaccTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGa < 6:315780/149‑1 (MQ=255) caccTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCGCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACt < 3:231358/149‑1 (MQ=255) cTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTTGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGa > 8:73931/1‑149 (MQ=255) cgcCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGAtctc < 3:275998/149‑1 (MQ=255) gcCCGAGCCGTGGCAATTCGTCGATGCCATCGGCGGCAGCCTTGAAGCTGTCGTACTCCTGCAGTCGGCGGATCAGTTGGGAGCGTGGGTGTCCCTCATCCTCCTCGACGTCTGCGGAACGCTGCTGCAGCTTGCGTGACTTGTTCTCg < 4:157050/149‑1 (MQ=255) gcCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCg < 7:284780/149‑1 (MQ=255) gcCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCAC‑‑‑CCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGcc < 8:29307/149‑1 (MQ=255) gcCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCAC‑‑‑CCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGcc < 8:34177/149‑1 (MQ=255) gACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCa < 6:59046/149‑1 (MQ=255) cccGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAg > 2:302056/1‑148 (MQ=255) tGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATgg > 6:276942/1‑149 (MQ=255) cgtcgATGCCCTCGGCGGCAGCCTTGCAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCAt < 6:236217/148‑1 (MQ=255) tcgATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGgc > 1:164794/1‑105 (MQ=255) tcgATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGgc < 2:164794/105‑1 (MQ=255) gATGCCCTTGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCAcc < 7:73931/148‑1 (MQ=255) gATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCa < 5:276942/149‑1 (MQ=255) aTGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAg < 1:118128/149‑1 (MQ=255) ccTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACTTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTAt > 6:17975/1‑149 (MQ=255) ccTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCa > 3:87116/1‑144 (MQ=255) ccTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCa < 4:87116/144‑1 (MQ=255) ccTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTAt > 1:9161/1‑149 (MQ=255) tCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTc > 8:235709/1‑149 (MQ=255) aGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCAt < 5:32840/120‑1 (MQ=255) aGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCAt > 6:32840/1‑120 (MQ=255) cTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCATCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTc < 5:297898/138‑1 (MQ=255) cTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCATCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTc > 6:297898/1‑138 (MQ=255) aaGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAg < 7:235709/149‑1 (MQ=255) aGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAgg < 2:230025/149‑1 (MQ=255) gcgcTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCt < 1:266054/143‑1 (MQ=255) gcgcTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCt > 2:266054/1‑143 (MQ=255) cgcTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCg > 8:179582/1‑149 (MQ=255) cTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTa > 1:255401/1‑149 (MQ=255) cTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTa < 3:288051/149‑1 (MQ=255) gTACTACTGCAGGCGGCGGATCAGTTCGGAGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGc > 6:10950/1‑149 (MQ=255) aCTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCggcggc < 4:116572/130‑1 (MQ=255) aCTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCggcggc > 3:116572/1‑130 (MQ=255) tCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGAGGCCCGCTCAAGGCGTACGCtttt > 4:45868/1‑149 (MQ=255) cTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTtc < 1:302056/148‑1 (MQ=255) cTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGCACCGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGAATAGCAGCCATCACCACGTATTCGGCGGCCAGCTCAAGGCGTACGGTTTtc > 2:219701/1‑148 (MQ=255) gCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCtt < 6:167941/143‑1 (MQ=255) gCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCtt > 5:167941/1‑143 (MQ=255) cAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTtcat < 6:262908/147‑1 (MQ=255) cAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTtcat > 5:262908/1‑147 (MQ=255) cAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTtcat < 8:263673/147‑1 (MQ=255) ggATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCcaca < 2:255401/149‑1 (MQ=255) ttCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTAtt < 8:33163/101‑1 (MQ=255) ttCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTAtt > 7:33163/1‑101 (MQ=255) ttCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCt > 3:53176/1‑137 (MQ=255) ttCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCt < 4:53176/137‑1 (MQ=255) ttCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCCACATAGCCCa > 3:257621/1‑149 (MQ=255) tGGGGCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCCACATAGCCCATGTACTGcc < 4:97518/149‑1 (MQ=255) cACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTGATCAGCTCCACATAGCCCATGTACTGCCGGGTg < 5:17975/149‑1 (MQ=255) aCCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCCACATAGCCCATGTACTGCCGGGTg < 7:179582/148‑1 (MQ=255) aCCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCCACATAGCCCATGTACTGCCGGGTGa < 3:225048/149‑1 (MQ=255) | GTACCTTGGCCTGCGGCGCTTCCAGGCGCGGCACCACCACCTCGCGCCCGACCCGTGGCAATTCGTCGATGCCCTCGGCGGCAGCCTTGAAGCGCTCGTACTCCTGCAGGCGGCGGATCAGTTCGGCGCGTGGGTCACCCTCCTCCTCCTCGACGTCGGCGGAACGCGGCAGCAGCATGCGTGACTTGATCTCGGCCAGCATGGCAGCCATCACCAGGTATTCGGCGGCCAGCTCAAGGCGTACGCTTTTCATCAGCTCCACATAGCCCATGTACTGCCGGGTGA > NC_002947/5113772‑5114056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |