| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,911 | Δ1 bp | 31.6% | intergenic (+205/‑341) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,911 | 0 | A | . | 31.6% | 169.5 / 87.5 | 76 | intergenic (+205/‑341) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base A (24/26); new base . (15/9); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAA > NC_002947/5988768‑5989057 | cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaaac < 3:278129/149‑1 (MQ=255) gggTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAg > 4:159235/1‑149 (MQ=255) aaaCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCAGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTGGCGCGCGCCTGGGA‑CAGGAGGGATTGGCCAGAAACAAACGGAGGAGc > 8:223812/1‑149 (MQ=255) aaCCCGCTCCTACGTTTGTTTCGGGCCAATTATTACTGCGGGATTTGCGCGCGACCGCCATGCGGCATGTCACGATATAGCGTCGTACAAACAA‑GCCGCTCGCGCGCGACTGGTG‑CAGGAGGCACT‑GCCCGAAACAAACGTAGGAGCgc > 6:146087/1‑148 (MQ=12) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaaacaaa > 2:219624/1‑138 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCACTTAATCCTGTGGGACGCGCACGCCAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAACGTCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaaacaaa < 1:219624/139‑1 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCggg > 2:202311/1‑149 (MQ=11) aCCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCggg > 2:206650/1‑149 (MQ=11) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg < 8:126260‑M2/148‑7 (MQ=255) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgc > 7:46111‑M2/1‑142 (MQ=255) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgc < 8:46111‑M2/147‑6 (MQ=255) gtttgattCGTGCAAGTTATTACTGTGCGACGCGCACGCGAGCCCCCTGGCGCAAGCCTCGATATCGCGTCGTACAAAAAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAaccgcg < 4:284802‑M2/148‑7 (MQ=255) tttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CATGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAg > 5:296954/1‑149 (MQ=11) tttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAg > 6:293296/1‑149 (MQ=11) ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaag < 7:291804‑M2/149‑10 (MQ=255) tgtttCGGGCGAGTTATTCCTGTGGGACGCGCACGCGAGCGCCCTGGCGCACGCCTCGATATCGCGTCTTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGTATTGGCCATAAACAAACGTAGGAGCGGGTTTAcccgcgaag > 3:284802‑M2/1‑139 (MQ=255) tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcga > 6:290750‑M2/1‑137 (MQ=255) tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcga < 5:290750‑M2/144‑8 (MQ=255) cGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATGGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgc < 8:91843‑M2/149‑16 (MQ=255) ggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt > 8:153060/1‑130 (MQ=255) ggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt < 7:153060/130‑1 (MQ=255) ccAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGTACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCCCGAAGCCCCGCgcggg > 3:207473/1‑149 (MQ=9) caattATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggc > 7:270282/4‑149 (MQ=14) gTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcg < 3:184014‑M2/149‑23 (MQ=255) ttATTCCTGTGGGACGCGCACGCGAGCCCCCGGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcgg > 7:91843‑M2/1‑126 (MQ=255) cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc > 4:184014‑M2/1‑120 (MQ=255) tgtgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 3:12149‑M2/149‑31 (MQ=255) tgtgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 7:53943‑M2/149‑31 (MQ=255) tgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatc < 8:81124‑M2/149‑33 (MQ=255) tgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatc < 6:244784‑M2/149‑33 (MQ=255) aCGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgcc < 1:122104‑M2/126‑14 (MQ=255) cgcgCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg < 7:223812/149‑1 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg < 5:173886/149‑1 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg > 2:247073/1‑149 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg > 6:173886/1‑149 (MQ=255) cccccTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGTGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCacaaa > 6:204196/1‑149 (MQ=255) cttggGGCATGTCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctc < 8:157211‑M2/147‑54 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCAGCAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCGCGATCTCATGGGCGCGCAAAAAc > 1:245505/1‑148 (MQ=255) gcgcACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATc < 7:81124/147‑1 (MQ=255) gcgcACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATc < 5:244784/147‑1 (MQ=255) tctCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccg > 8:138002‑M2/2‑85 (MQ=255) tctCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccg < 7:138002‑M2/139‑56 (MQ=255) tCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgct < 8:92294‑M2/111‑28 (MQ=255) tCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgct > 7:92294‑M2/1‑84 (MQ=255) gATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctca > 7:157211‑M2/1‑81 (MQ=255) tatCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa < 4:12149/149‑1 (MQ=255) gtcgtACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATc < 8:53943/149‑1 (MQ=255) gtcgtACAAACAA‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaa < 1:84291‑M2/149‑77 (MQ=255) aaacaa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg > 1:71750/1‑104 (MQ=255) aaacaa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg < 2:71750/104‑1 (MQ=255) aacaa‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatc > 6:268780‑M2/1‑65 (MQ=255) aacaa‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatc < 5:268780‑M2/115‑51 (MQ=255) acaa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAttt > 2:167647/1‑149 (MQ=255) acaa‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtcca < 4:208814‑M2/149‑86 (MQ=255) aa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAATCAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc > 8:118349/1‑149 (MQ=255) aa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg > 7:42123/1‑101 (MQ=255) aa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg < 8:42123/101‑1 (MQ=255) aa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgcgc > 6:216889/1‑105 (MQ=255) aa‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgcgc < 5:216889/105‑1 (MQ=255) aa‑GGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccact < 2:130649‑M2/149‑88 (MQ=255) ccagtcgCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaac < 7:59427‑M2/117‑62 (MQ=255) ccagtcgCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaac > 8:59427‑M2/4‑59 (MQ=255) cgcgcgaCTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaactcctcaaaattccaacgccgtccactcaaaattc < 8:147213‑M2/147‑96 (MQ=255) cgcgcgaCTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTAAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattc > 7:147213‑M2/1‑52 (MQ=255) gcgcgaCTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaa < 4:95242‑M2/149‑99 (MQ=255) ccgcgacTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaa > 1:202311‑M2/2‑51 (MQ=255) cgcgaCTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaac > 3:208814‑M2/1‑50 (MQ=255) cgaCTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgc > 2:84291‑M2/1‑48 (MQ=255) gaggGATTGGCCATAAACAAACTTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAc < 3:159235/147‑1 (MQ=255) gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc > 2:308063/1‑149 (MQ=255) gACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgctaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaaaattc > 5:146087‑M2/1‑32 (MQ=255) aTTGGCCAGAAACAAACGTAGGAGCGGGTTTACACGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCATGCACCTGGAAGCCATCATGCAATTTCCTGAAGATCACCTCGCCGCCATGAAGAGAAc > 7:131463/1‑148 (MQ=37) gCCCGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaaaattccaac > 7:262401‑M2/1‑28 (MQ=255) gCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTcac > 7:55790/1‑148 (MQ=255) ccAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTcaca > 7:40247/1‑148 (MQ=255) cAGAAACAAACGTAGGAGAGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCCCTCTATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCAGAAATTTACTCACGATCACATCGCCGCAATGACGCGAACTCaaaa > 8:213410/1‑148 (MQ=37) | CGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAA‑GGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAA > NC_002947/5988768‑5989057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |