| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,251,589:1 | +G | 7.7% | coding (253/603 nt) | PP_1094 ← | electron transport complex protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,251,589 | 1 | . | G | 7.7% | 251.9 / 16.0 | 65 | coding (253/603 nt) | PP_1094 | electron transport complex protein |
| Reads supporting (aligned to +/- strand): ref base . (24/36); new base G (2/3); total (26/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01 | |||||||||||
CCAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCG > NC_002947/1251442‑1251737 | ccAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑t > 8:28297/1‑149 (MQ=255) aGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGc < 2:268490/149‑1 (MQ=255) gATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATa > 2:296033/1‑149 (MQ=255) tCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGt < 2:628/149‑1 (MQ=255) gCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTgg < 7:173451/149‑1 (MQ=255) cccAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCactatgg > 6:79705/1‑143 (MQ=255) ccAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCa > 2:137527/1‑149 (MQ=255) cAGCCCGGGCCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCAc > 4:214155/1‑149 (MQ=255) aGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATa < 5:206799/141‑1 (MQ=255) aGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATa > 6:206799/1‑141 (MQ=255) ccGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGTGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTa < 4:215091/149‑1 (MQ=255) tggggCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATa < 2:217754/136‑1 (MQ=255) tggggCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATa > 1:217754/2‑137 (MQ=255) ggggCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAg < 5:79705/149‑1 (MQ=255) ggCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgcc < 5:290138/149‑1 (MQ=255) ttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGc < 5:250643/149‑1 (MQ=255) ttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGc > 6:250643/1‑149 (MQ=255) gACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTAt > 1:1942/1‑149 (MQ=255) aaCCTGGCTGCCTATCAGCCGGCCGTCCGTGGTGATGGCGACGGTCAGC‑ACGATCGTCCCGGCATACCCGTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTgg < 5:218486/149‑1 (MQ=255) aaCCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTgg > 3:300211/1‑149 (MQ=255) aCCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTggg < 3:214155/149‑1 (MQ=255) ccTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCTACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTggg > 1:70373/1‑149 (MQ=255) tGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGc < 2:128070/143‑1 (MQ=255) tGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGc > 1:128070/1‑143 (MQ=255) ccGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgc > 8:91613/1‑149 (MQ=255) tCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggcg > 6:245912/1‑149 (MQ=255) aGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGcggcgg < 4:130322/148‑1 (MQ=255) aGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGcggcgg < 2:70373/148‑1 (MQ=255) ccggccgTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGc > 8:113233/1‑148 (MQ=255) ggccgTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCtt < 3:199156/149‑1 (MQ=255) tccgtGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGa > 1:25031/1‑112 (MQ=255) tccgtGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGa < 2:25031/112‑1 (MQ=255) tggtgATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCggg < 7:91613/149‑1 (MQ=255) tggtgATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCggg < 4:300211/149‑1 (MQ=255) aTGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTc < 1:296033/149‑1 (MQ=255) cGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAgg < 3:147964/149‑1 (MQ=255) gACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAggg > 5:168377/1‑149 (MQ=255) cGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGc < 7:28297/149‑1 (MQ=255) cTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTg < 1:121649/149‑1 (MQ=255) cAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTc > 5:13597/1‑138 (MQ=255) cAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTc < 6:13597/138‑1 (MQ=255) aGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg < 6:167496/147‑1 (MQ=255) aGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt < 2:1942/149‑1 (MQ=255) gC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTg < 7:113233/149‑1 (MQ=255) c‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCCGGATAATGGCGCTTGGCTTACC‑TGCCATAGGGGCACGGTAAGCCGCCAGGATACGCCTATTGGGCCTCTGTGCGGC‑GGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTc < 4:93907/149‑1 (MQ=255) aTCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATa < 5:245912/149‑1 (MQ=255) aTCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATa < 5:127155/149‑1 (MQ=255) ccGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAcc > 2:204689/1‑149 (MQ=255) cccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCGATAGTGGCACGGTAAGCCGCCAGGATACGGGTATTGGGCCTCTGTGCGGCGGGCCTTGGCCGCGGGCTTTCCAGGGGCTGGTTGTCATGGCTACCGTCGGgcag > 5:150874/1‑149 (MQ=255) ccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAcc < 8:128435/139‑1 (MQ=255) ccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAcc > 7:128435/1‑139 (MQ=255) cTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCa > 1:99688/1‑149 (MQ=255) tgtgATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGCCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGc < 8:23609/148‑1 (MQ=255) aTCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCt < 1:204689/148‑1 (MQ=255) tCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTgg > 8:80106/1‑149 (MQ=255) aTGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCCAGCGGCtgg < 1:137527/148‑3 (MQ=255) ggCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTg > 4:162343/1‑147 (MQ=255) gcgcTTGGATTACC‑TGACATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCa < 6:150874/148‑1 (MQ=255) gCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCAc > 7:34868/1‑118 (MQ=38) gCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCAc < 8:34868/118‑1 (MQ=38) gCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg > 6:133700/1‑92 (MQ=255) gCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg < 5:133700/92‑1 (MQ=255) cTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCtttt < 3:162343/149‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCtttt > 7:46374/1‑148 (MQ=255) aCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 7:80106/148‑1 (MQ=255) aCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 6:168377/148‑1 (MQ=255) c‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAgcg > 7:181302/1‑149 (MQ=255) | CCAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGC‑ACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCG > NC_002947/1251442‑1251737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |