Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,420,602:1 +T 10.3% intergenic (+85/+22) ctpH → / ← PP_t62 methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,420,6021.T10.3% 209.9 / 17.5 58intergenic (+85/+22)ctpH/PP_t62methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
Reads supporting (aligned to +/- strand):  ref base . (29/23);  new base T (2/4);  total (31/27)
Fisher's exact test for biased strand distribution p-value = 4.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01

GGGCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCTTGTTGT  >  NC_002947/2420455‑2420749
                                                                                                                                                    |                                                                                                                                                     
gggCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATgg                                                                                                                                                      >  2:34742/1‑149 (MQ=255)
     gcgcCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCCCACACAACACAAAGCCCGCACATGGCGGGc                                                                                                                                                 <  1:25566/149‑1 (MQ=255)
        ccTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCttt                                                                                                                                              <  8:179560/149‑1 (MQ=255)
        ccTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCttt                                                                                                                                              <  1:219164/149‑1 (MQ=255)
            cATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGa                                                                                                                                          >  3:294460/1‑149 (MQ=255)
            cATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtgtg                                                                                                                                           <  6:144870/148‑1 (MQ=255)
            cATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtgt                                                                                                                                            <  4:122737/147‑1 (MQ=255)
              tGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGAc                                                                                                                                         >  1:104156/1‑148 (MQ=255)
                gTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACaa                                                                                                                                       <  4:294460/148‑1 (MQ=255)
                            aggtGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGga                                                                                                                          <  8:132355/146‑1 (MQ=255)
                              ttGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGgaga                                                                                                                        <  2:104156/149‑1 (MQ=255)
                                gggCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCttt                                                                                                                                              >  7:61519/1‑125 (MQ=255)
                                gggCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCttt                                                                                                                                              <  8:61519/125‑1 (MQ=255)
                                 ggCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGAc                                                                                                                     <  2:206293/149‑1 (MQ=255)
                                    gAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGga                                                                                                                          <  6:65829/141‑1 (MQ=255)
                                    gAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGga                                                                                                                          >  5:65829/1‑141 (MQ=255)
                                          aCCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCg                                                                                                             >  1:203447/1‑148 (MQ=255)
                                             tCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtg                                                                                                                                             >  2:3245/1‑113 (MQ=255)
                                             tCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtg                                                                                                                                             <  1:3245/113‑1 (MQ=255)
                                                cGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGc                                                                                                      <  2:203447/149‑1 (MQ=255)
                                                      aGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGAACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGcc                                                                                                  <  1:34742/147‑1 (MQ=255)
                                                                tCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCATATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCg                                                                                     >  8:55861/1‑148 (MQ=255)
                                                                  ggTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAAc                                                                                  <  8:42959/149‑1 (MQ=255)
                                                                  ggTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTAATTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGaa                                                                                   >  7:42959/1‑148 (MQ=255)
                                                                        cAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGt                                                                                           <  6:47066/136‑1 (MQ=255)
                                                                        cAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGt                                                                                           >  5:47066/1‑136 (MQ=255)
                                                                        cAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGAcg                                                                            >  6:175724/1‑149 (MQ=255)
                                                                         aGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGGGCACTGACGTATTTTTCGCACACAACACAAAGACCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTtc                                                                                               >  3:306094/1‑131 (MQ=255)
                                                                                    gTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCtt                                                                                                >  7:15900/1‑119 (MQ=255)
                                                                                    gTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCtt                                                                                                <  8:15900/119‑1 (MQ=255)
                                                                                    gTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑TCGGGACgagaaggcc                                                                         >  5:175257/1‑135 (MQ=255)
                                                                                    gTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑TCGGGACgagaaggcc                                                                         <  6:175257/140‑6 (MQ=255)
                                                                                    gTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCt                                                                >  3:9972/1‑149 (MQ=255)
                                                                                          tAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCt                                                           >  4:142715/1‑148 (MQ=255)
                                                                                                 tGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTcc                                                    >  8:169865/1‑148 (MQ=255)
                                                                                                        gcgcACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAAc                                             >  8:176693/1‑148 (MQ=255)
                                                                                                            aCTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAAt                                        >  7:187063/1‑149 (MQ=255)
                                                                                                              tGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTc                                                     >  5:62869/1‑134 (MQ=255)
                                                                                                              tGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTc                                                     <  6:62869/134‑1 (MQ=255)
                                                                                                                 cGTATTTTTCGCACACAACACAAAGCCCGCATATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTAc                                   <  7:55861/149‑1 (MQ=255)
                                                                                                                 cGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTa                                    <  4:9972/148‑1 (MQ=255)
                                                                                                                  gTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACt                                  >  5:27422/1‑149 (MQ=255)
                                                                                                                      ttttCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCAt                              >  2:91894/1‑149 (MQ=255)
                                                                                                                        ttCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATc                             <  5:175724/148‑1 (MQ=255)
                                                                                                                             acacaacacaAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGttt                       >  3:23643/1‑149 (MQ=255)
                                                                                                                               acaacacaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGtt                        <  6:321594/146‑1 (MQ=255)
                                                                                                                               acaacacaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGtt                        >  5:321594/1‑146 (MQ=255)
                                                                                                                                 aacacaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGc                   >  8:11568/1‑149 (MQ=255)
                                                                                                                                  tcacaaAGCCCGCCATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCt                  >  3:78974/2‑149 (MQ=255)
                                                                                                                                    acaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCg                <  7:11568/149‑1 (MQ=255)
                                                                                                                                        aGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAg            >  5:122152/1‑149 (MQ=255)
                                                                                                                                         gCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGc           >  5:9058/1‑149 (MQ=255)
                                                                                                                                          cccGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGcc          >  2:288720/1‑149 (MQ=255)
                                                                                                                                            cGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCt        >  7:52021/1‑149 (MQ=255)
                                                                                                                                               acaTGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCttgt     <  1:288720/149‑1 (MQ=255)
                                                                                                                                               acaTGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTAGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCAGATGAACAAAATCATACTGCATCCCGTTTTTGCTCGCAAGCCAttgt     >  3:188607/1‑149 (MQ=255)
                                                                                                                                                 aTGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTgcgc                                                            >  6:192452/1‑92 (MQ=255)
                                                                                                                                                 aTGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTgcgc                                                            <  5:192452/92‑1 (MQ=255)
                                                                                                                                                  tGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCtttaaac  <  7:169865/149‑6 (MQ=255)
                                                                                                                                                   ggCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTGGCCCGAACTAGACGCGATACCTGGCTGCGATACACTCCTATGAAAAAAATCATACTGCATCCCGTTTTTGCACGCAACCCCtttttg   >  1:249404/1‑149 (MQ=255)
                                                                                                                                                   ggCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGttttt                     >  2:45221/1‑129 (MQ=255)
                                                                                                                                                   ggCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGttttt                     <  1:45221/129‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GGGCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGT‑‑CCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCTTGTTGT  >  NC_002947/2420455‑2420749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: