New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 137335 | 55 (1.110) | 6 (0.130) | 4/240 | NT | 10.5% | coding (236/1608 nt) | PP_0131 | membrane‑anchored phosphodiesterase |
? | NC_002947 | = 137379 | 51 (1.100) | coding (280/1608 nt) | PP_0131 | membrane‑anchored phosphodiesterase |
CCAGCGCCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/137182‑137335 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgcaAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGATCGACCCCTTCGCGCAGTTGGCCGAACACCTGTTCGAGCCGTTCCAGAAAACGCTCGCCCTGGGCATTCATCTGTTCGCTTTCGCTTTGTTT < NC_002947/137379‑137235 CCAGCGCCGCGGTGTTGCTCTCAGCCAGCAGCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTG < 4:201532/149‑1 CAGCGCCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGC < 5:294355/149‑1 CCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTG > 3:32310/1‑146 CCGCGGTGGTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGGCGATCTGCTG < 4:32310/146‑1 GCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCGACTGCGCGAAGGGGTCGATCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCC > 4:175231/1‑149 CAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGC < 1:64927/141‑1 CAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGC < 1:69466/141‑1 CAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGC > 2:64927/1‑141 CAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGC > 2:69466/1‑141 AGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCGACTGCGCGAAGGGGTCGATCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGAT < 3:175231/149‑1 cagcCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGATCGACCCCTTCGCGCAGTTGGCCGAACACCTGTTCGAGCCGTTCCAGAAAACGCTCGCCCTGGGCATTCATCTGTTC > 5:315385/5‑142 cagcCTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGATCGACCCCTTCGCGCAGTTGGCCGAACACCTGTTCGAGCCGTTCCAGAAAACGCTCGCCCTGGGCATTCATCTGTTC < 6:315385/138‑1 CTGCTGCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGATCGACCCCTTCGCGCAGTTGGCCGAACACCTGTTCGAGCCGTTCCAGAAAACGCTCGCCCTGGGCATTCATCTGTTCGCTTTCGCTTT < 6:75873/149‑1 GCAAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGATCGACCCCTTCGCGCAGTTGGCCGAACACCTGTTCGAGCCGTTCCAGAAAACGCTCGCCCTGGGCATTCATCTGTTCGCTTTCGCTTTGTTT > 7:30480/1‑148 CCAGCGCCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCGGCCAACTGCGCGAAGGGGTCGATCTGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/137182‑137335 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgcaAGGCTGCCAACATTGCCGGGCTGCAGCCGCGCAAGGGTTGGGCCTGCAGCAGATCGACCCCTTCGCGCAGTTGGCCGAACACCTGTTCGAGCCGTTCCAGAAAACGCTCGCCCTGGGCATTCATCTGTTCGCTTTCGCTTTGTTT < NC_002947/137379‑137235 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |