New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	216967 =	54 (1.090)	12 (0.250)	7/248	NT	19.3%	coding (22473/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	217038 =	48 (1.000)					coding (22544/26049 nt)	PP_0168	putative surface adhesion protein

CGCCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/217118‑216967 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAAC  >  NC_002947/217038‑217142                                                                                                                                                                                                                                                                    CGCCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTG                                                                                                              >  5:283439/1‑149   CCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGCTACCGACGTAGAAGTTGTCTGGGGCAGTGACGGTAGCAGTGCCCACGGAGCCGTTCGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGTTCAATGCACTGTG                                                                                                            >  4:129148/1‑149    CAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGG                                                                                                           <  2:216814/149‑1    CAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGG                                                                                                           >  5:21000/1‑149     AACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGG                                                                                                           <  6:33313/148‑1                                                           CGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGCTCGCTCAGCGTGAAGGTCAATGCACTGTGG                                                                                                           <  1:28030/95‑1                                                           CGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGG                                                                                                           >  2:28030/1‑94                                                                     ACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATC                                           >  7:195026/1‑148                                                                                GCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGT                               >  3:242584/1‑149                                                                                 CCCACGGTGCCGTTGGCAGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTT                              >  1:230268/1‑149                                                                                  CCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGGTCGCAACCGTTG                             >  8:282247/1‑149                                                                                   CACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTG                             >  8:148202/1‑148                                                                                   CACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCCCAACCGTTG                             >  5:68932/1‑148                                                                                    ACGTTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCAG‑TCGATCAGCGTTAAGGTCAATGCACTGTGGTCACTGCTACCGTCACTGCCCCGGACAAGGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGAT                                        <  3:195062/136‑1                                                                                    ACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGACCCGGACAACGTCGACGTCGGTACCAACGACCCTGTGATCAAATCGAT                                        >  4:195062/1‑136                                                                                      GGTGCCGTTGGCCGGCACGGTGATGACGGTTCTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGG                         >  4:220513/1‑149                                                                                             TTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGAT                  <  8:195026/149‑1                                                                                                     CACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAA          <  7:148202/149‑1                                                                                                             TGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAAC  <  2:230268/149‑1                                                                                                                                                                                                                                                                    CGCCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCG‑TCGCTCAGCGTGAAGGTCAATGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/217118‑216967 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAAC  >  NC_002947/217038‑217142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.