New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 352291 | 54 (1.090) | 4 (0.090) | 4/244 | NT | 6.8% | coding (29/771 nt) | hisF | imidazole glycerol phosphate synthase subunit HisF |
? | NC_002947 | = 352318 | 59 (1.250) | coding (56/771 nt) | hisF | imidazole glycerol phosphate synthase subunit HisF |
CCTGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/352138‑352291 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttgACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCT < NC_002947/352318‑352198 CCTGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATC > 1:305396/1‑149 CTGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCC > 7:5513/1‑149 TGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCC > 5:125207/1‑149 CTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTT > 5:325497/1‑149 CAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCC > 1:199990/1‑149 GGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAAT < 2:199990/149‑1 TACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATA > 7:16102/1‑135 TACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATA < 8:16102/135‑1 CTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCT < 3:272289/125‑1 CTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCT > 4:272289/1‑125 CCTGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/352138‑352291 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttgACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCT < NC_002947/352318‑352198 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |