| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 624509 = | 45 (0.910) | 3 (0.060) | 3/240 | NT | 5.7% | coding (398/702 nt) | PP_0537 | transcriptional regulator |
| ? | NC_002947 | 624553 = | 58 (1.250) | coding (354/702 nt) | PP_0537 | transcriptional regulator | |||||
CCCGCCAACCCGCTTACCCCGCTGTCGGAACATCGTGGCCGGGTATTGAAGGTGCCCTACTACGAAGTGCGCAACGGCTTGCTGTCGCCGGTGGGCAGCAAGCACCTGCGCTTGCCGGCAAAAGCCCTGAAGGGCTTGGGTGTGCAAGCCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/624663‑624509‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaaGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGCGGGCGCTGGCCGTGGACGGCCGTTGCGCAGGAGTGGATTG > NC_002947/624553‑624700 CCCGCCAACCCGCTTACCCCGCTGTCGGAACATCGTGGCCGGGTATTGAAGGTGCCCTACTACGAAGTGCGCAACGGCTTGCTGTCGCCGGTGGGCAGCAAGCACCTGCGCTTGCCGGCAAAAGCCCTGAAGGGCTTGGGTGTGCAAGC < 5:63494/149‑1 CCTGCGCTTGCCGGCAAAAGCCCTGAAGGGCTTGGGTGTGCAAGCCGGCAAGCGCAGGTGCTTGCTGCCCACCGGCGCCAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGAACGCGGGGg > 4:243518/1‑146 TTGCCGGCAAAAGCCCTGAAGGGCTTGGGTGTGCAAGCCGGCAAGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACA > 7:18188/1‑133 TTGCCGGCAAAAGCCCTGAAGGGCTTGGGTGTGCAAGCCGGCAAGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACA < 8:18188/133‑1 GCCGGCAAGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGCGGGCGCTGGCCGTGGACGGCCGTTGCGCAGGA < 4:68653/148‑1 CCGGCAAGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGCGGGCGCTGGCCGTGGACGGCCGTTGCGCAGGAG < 7:208978/148‑1 GGCAAGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGCGGGCGCTGGCCGTGGACGGCCGTTGCGCAGGAGTG > 2:120611/1‑148 GCAAGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAACCGTTGCGCACTTCGTAGTAGGGCACATTAAAAACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGAGGGCGATGGCCGTGGACGGCGGGGGCGCAGGAGggaa > 8:198141/1‑145 AGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGCGGGCGCTGGCCGTGGACGGCCGTTGCGCAGGAGTGGATTG < 6:63494/149‑1 CCCGCCAACCCGCTTACCCCGCTGTCGGAACATCGTGGCCGGGTATTGAAGGTGCCCTACTACGAAGTGCGCAACGGCTTGCTGTCGCCGGTGGGCAGCAAGCACCTGCGCTTGCCGGCAAAAGCCCTGAAGGGCTTGGGTGTGCAAGCCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/624663‑624509‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaaGCGCAGGTGCTTGCTGCCCACCGGCGACAGCAAGCCGTTGCGCACTTCGTAGTAGGGCACCTTCAATACCCGGCCACGATGTTCCGACAGCGGGGTAAGCGGGTTGGCGGGCGCTGGCCGTGGACGGCCGTTGCGCAGGAGTGGATTG > NC_002947/624553‑624700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |