New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 760762 = | 54 (1.090) | 3 (0.060) | 3/240 | NT | 5.8% | coding (778/1386 nt) | PP_0652 | gluconate transporter |
? | NC_002947 | 760812 = | 46 (0.990) | coding (728/1386 nt) | PP_0652 | gluconate transporter |
GCATGTTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGCATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/760917‑760762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgccgACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAATGAACATGCCGTACAGCGGGCCGCCCAGGATCATTGCCGGAATGGCGGC > NC_002947/760812‑760957 GCATGTTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTG > 1:239435/1‑149 CATGTTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGC < 6:31206/149‑1 CATGTTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGC < 7:48680/149‑1 TGTTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGCAT < 8:29745/149‑1 TTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGCATGC > 7:282947/1‑149 GTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGCATGCCGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAA > 5:51908/1‑149 CGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGCATGCCGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAAT > 5:262463/1‑148 GCATGCTGGCCGCATTGCTGCAGGCCATCCTGATGCTGGTGCATGCCGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAATGAA < 6:262463/149‑1 CATGCCGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAATGAACATGCCGTACAGCGGGCCGCCCAGGATCATTGCCGGAATGG > 3:191612/1‑149 ATGCCGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGTTCGGGCCGCGTGTTCATGCGCGGTGAAATGAACATGCCGTACAGCGGGCCGCCCAGGATCATTGCCGGAATGGC < 5:178519/149‑1 GCCGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAATGAACATGCCGTACAGCGGGCCGCCCAGGATCATTGCCGGAATGGCGG > 7:21696/1‑149 CGACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAATGAACATGCCGTACAGCGGGCCGCCCAGGATCATTGCCGGAATGGCGGC > 4:231680/1‑148 GCATGTTCATTTCACCGCGCATGAACACGCGGCCCGATCAGGCATTGCTGGACCAGTTCACACTGGCTGAAAAAGCCGATGGCCAACCCCGCCCCGGGGTAATGGTCGGCATGCTGGCCGCATTGCTGCCGGCCATCCTGATGCTGGTGCATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/760917‑760762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgccgACCATTACCCCGGGGCGGGGTTGGCCATCGGCTTTTTCAGCCAGTGTGAACTGGTCCAGCAATGCCTGATCGGGCCGCGTGTTCATGCGCGGTGAAATGAACATGCCGTACAGCGGGCCGCCCAGGATCATTGCCGGAATGGCGGC > NC_002947/760812‑760957 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |