New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1188256 = | 74 (1.500) | 5 (0.100) | 5/252 | NT | 6.3% | coding (3461/3900 nt) | purL | phosphoribosylformylglycinamidine synthase |
? | NC_002947 | 1188298 = | 77 (1.580) | coding (3503/3900 nt) | purL | phosphoribosylformylglycinamidine synthase |
TCGAACTGCTCCGAGCGGTTGCGCACGAAGTGCGGCCAGTACTCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1188304‑1188256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGCCATGCCGAGTTCGCCAGCGAAGAAGCATTGCTGGAAGCCGA > NC_002947/1188298‑1188445 TCGAACTGCTCCGAGCGGTTGCGCACGAAGTGCGGCCAGTACTCGGTGCAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGG > 1:27853/1‑149 TGCTCCGAGCGGTTGCGCACGAAGTGCGGCCAGTACTCGGTGCAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGG > 1:42394/1‑149 CTCCGAGCGGTTGCGCACGAAGTGCGGCCAGTACTCGGTGCAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGC > 8:9202/1‑148 TTGCGCACGAAGTGCGGCCAGTACTCGGTGCAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGCCATGCCGAGTT < 7:9202/149‑1 GTGCGGCCAGTACTCGGTGCAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGCCATGCCGAGTTCGCCAGCGAAG < 2:42394/149‑1 GGTGCAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGCCATGCCGAGTTCGCCAGCGAAGAAGCATTGCTGGAA < 2:27853/148‑1 CAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGCCATGCCGAGTTCGCCAGCGAAGAAGCATTGCTGGAAGCCGA < 2:285755/149‑1 TCGAACTGCTCCGAGCGGTTGCGCACGAAGTGCGGCCAGTACTCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1188304‑1188256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcAGTTCGAGGCCCGCGTGGCCATGGTCGAAGTGCAGAAGTCCAACTCGATCTTCCTGCAGGGCATGGCCGGTTCGCGCATGCCGATCGCCATCGCCCACGGCGAAGGCCATGCCGAGTTCGCCAGCGAAGAAGCATTGCTGGAAGCCGA > NC_002947/1188298‑1188445 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |