| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1704143 = | 58 (1.170) | 4 (0.080) | 4/246 | NT | 6.4% | coding (79/549 nt) | PP_1498 | lipoprotein |
| ? | NC_002947 | 1704184 = | 61 (1.290) | coding (120/549 nt) | PP_1498 | lipoprotein | |||||
GTATTCTTCAGGGGCCTTGCCCTTGGCCGTGGCCACCGCCTTGTAGGCGTCGCCACCGCTACGGCTGATCACCAGTTTCAACGGTTCCTCCCAGGCGTCCTTGCTGCTCCACTTGCCGAGCAAGGCCTTGGGCGCTGCCTGGTTGCTGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1704295‑1704143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGTGTTCACCGTGTCACGCCACGGCAACCGCTGGTAC > NC_002947/1704184‑1704331 GTATTCTTCAGGGGCCTTGCCCTTGGCCGTGGCCACCGCCTTGTAGGCGTCGCCACCGCTACGGCTGATCACCAGTTTCAACGGTTCCTCCCAGGCGTCCTTGCTGCTCCACTTGCCGAGCAAGGCCTTGGGCGCTGCCTGGTTGCTGG < 5:122339/149‑1 CTCCACTTGCCGAGCAAGGCCTTGGGCGCTGCCTGGTTGCTGGGCAAGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCC > 4:110283/1‑149 CACTTGCCGAGCAAGGCCTTGGGCGCTGCCTGGTTGCTGGGCAAGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTG > 4:194180/1‑148 ACTTGCCGAGCAAGGCCTTGGGCGCTGCCTGGTTGCTGGGCAAGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTG > 6:50649/1‑147 AGCAAGGCCTTGGGCGCTGCCTGGTTGCTGGGCAAGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGT < 3:110283/149‑1 AGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGTGTTCACCGTGTCACGCCACGGCAACCGCTGGTAC < 2:165200/149‑1 AGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGTGTTCACCGTGTCACGCCACGGCAACCGCTGGTAC < 5:50649/149‑1 AGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGTGTTCACCGTGTCACGCCACGGCAACCGCTGGTAC > 6:118039/1‑149 AGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGTGTTCACCGTGTCACGCCACGGCAACCGCTGGTAC > 6:324733/1‑149 GTATTCTTCAGGGGCCTTGCCCTTGGCCGTGGCCACCGCCTTGTAGGCGTCGCCACCGCTACGGCTGATCACCAGTTTCAACGGTTCCTCCCAGGCGTCCTTGCTGCTCCACTTGCCGAGCAAGGCCTTGGGCGCTGCCTGGTTGCTGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1704295‑1704143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaGTGGAGCAGCAAGGACGCCTGGGAGGAACCGTTGAAACTGGTGATCAGCCGTAGCGGTGGCGACGCCTACAAGGCGGTGGCCACGGCCAAGGGCAAGGCCCCTGAAGAATACGTGTTCACCGTGTCACGCCACGGCAACCGCTGGTAC > NC_002947/1704184‑1704331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |