New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3027808	58 (1.170)	4 (0.090)	4/242	NT	6.5%	coding (1173/1491 nt)	PP_2642	GntR family transcriptional regulator
	?	NC_002947	= 3027822	60 (1.290)					coding (1187/1491 nt)	PP_2642	GntR family transcriptional regulator

TATATCGTGGCACCGGTGGAAGTGACAACCGTGCTGGAACGCAGGGCGATGCTGACCCTGGGGCAGGGCGATGCAGTCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3027671‑3027808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggTACTCGCGGTTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGGGTCAGCATCGCCCTGCGTTCCAGCACGGTTGTCACTTCCACCGGTGCCAC  <  NC_002947/3027822‑3027677                                                                                                                                                                                                                                                                                              TATATCGTGGCACCGGTGGAAGTGACAACCGTGCTGGAACGCAGGGCGATGCTGACCCTGGGGCAGGGCGATGCAGTCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTGCGCCGGTACTCGCGGTT                                                                                                                                         >  8:122022/1‑149        TGGCACCGGTGGAAGTGACAACCGTGCTGGAACGCAGGGCGATGCTGACCCTGGGGCAGGGCGATGCAGTCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTG                                                                                                                                                          >  3:39110/1‑125        TGGCACCGGTGGAAGTGACAACCGTGCTGGAACGCAGGGCGATGCTGACCCTGGGGCAGGGCGATGCAGTCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTG                                                                                                                                                          <  4:39110/125‑1                      GTGACAACCGTGCTGGAACGCAGGGCGATGCTGACCCTGGGGCAGGGCGATGCAGTCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTGCGCCGGTACTCGCGGTTGACCCGGCGCAAGTGCTTCTT                                                                                                                    <  7:122022/149‑1                                                                             TCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTGCGCCGGTACTCGCGGTTGACCCGGC                                                                                                                                 >  3:109349/1‑81                                                                             TCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTGCGCCGGTACTCGCGGTTGACCCGGC                                                                                                                                 <  4:109349/81‑1                                                                                                                                         GGTACTCGCGGTTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGGGTCAGCATCGCCCTGCGTTCCAGCACGGTTGTCACTTCCACCGGTGCCAC  >  3:294956/1‑148                                                                                                                                         GGTACTCGCGGTTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGG                                                    >  1:265387/1‑98                                                                                                                                         GGTACTCGCGGTTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGG                                                    <  2:265387/98‑1                                                                                                                                          GTACTCGCGGTTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGGGTCAGCATCGCCCTGGGTTCCAGCACGGTTGTCACTTCCACCGGT       >  5:306315/1‑142                                                                                                                                          GTACTCGCGGGTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGGGTCAGCATCGCCCTGCGTTCCAGCACGGTTGTCACTTCCACCGGT       <  6:306315/142‑1                                                                                                                                                                                                                                                                                              TATATCGTGGCACCGGTGGAAGTGACAACCGTGCTGGAACGCAGGGCGATGCTGACCCTGGGGCAGGGCGATGCAGTCATGCAGCAGATGTTGGCCGACCTGATCAATGATGGGGAACTGAAGAAGCACTTGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3027671‑3027808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggTACTCGCGGTTGACCCGGCGCAAGTGCTTCTTCAGTTCCCCATCATTGATCAGGTCGGCCAACATCTGCTGCATGACTGCATCGCCCTGCCCCAGGGTCAGCATCGCCCTGCGTTCCAGCACGGTTGTCACTTCCACCGGTGCCAC  <  NC_002947/3027822‑3027677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.