| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4215342 = | 61 (1.240) | 5 (0.100) | 5/248 | NT | 7.6% | coding (1701/2085 nt) | PP_3697 | hypothetical protein |
| ? | NC_002947 | 4215376 = | 62 (1.300) | coding (1667/2085 nt) | PP_3697 | hypothetical protein | |||||
GTCAGAATTCTCGAGGTTGATCCTCAGGTAGAAGCACGTGCATTTTTCCAGGATGGTTTCGCACGGAAGCTTGCCTTCAAGGCACACCCGTTCCGTAAAGCTGTTGAAGCCCTCATCGCGGCCAACGACCGCCATTGCGTGTCTGACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4215491‑4215342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCACGTGCTTCTACCTGAGGATCAACCTCGAGAAT > NC_002947/4215376‑4215485 GTCAGAATTCTCGAGGTTGATCCTCAGGTAGAAGCACGTGCATTTTTCCAGGATGGTTTCGCACGGAAGCTTGCCTTCAAGGCACACCCGTTCCGTAAAGCTGTTGAAGCCCTCATCGCGGCCAACGACCGCCATTGCGTGTCTGACGC > 5:119142/1‑149 CAGAATTCTCGAGGTTGATCCTCAGGTAGAAGCACGTGCATTTTTCCAGGATGGTTTCGCACGGAAGCTTGCCTTCAAGGCACACCCGTTCCGTAAAGCTGTTGAAGCCCTCATCGCGGCCAACGACCGCCATTGCGTGTCTGACGCG > 3:232370/1‑148 TCATCGCGGCCAACGACCGCCATTGCGTGTCTGACGCGATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCAGGTGCTTCTACCTGAGGATCAACCTCGAGAAT > 7:221871/1‑148 ATCGCGGCCAACGACCGCCATTGCGTGTCTGACGCGATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCACGTGCTTCTACCTGAGGA > 5:142201/1‑132 ATCGCGGCCAACGACCGCCATTGCGTGTCTGACGCGATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCACGTGCTTCTACCTGAGGA < 6:142201/132‑1 GCGGCCAACGACCGCCATTGCGTGTTGGCCGCGATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCACGTGCTTCTACCTGA < 1:201309/126‑1 GCGGCCAACGACCGCCATTGCGTGTTGGCCGCGATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCACGTGCTTCTACCTGA > 2:201309/1‑126 GTCAGAATTCTCGAGGTTGATCCTCAGGTAGAAGCACGTGCATTTTTCCAGGATGGTTTCGCACGGAAGCTTGCCTTCAAGGCACACCCGTTCCGTAAAGCTGTTGAAGCCCTCATCGCGGCCAACGACCGCCATTGCGTGTCTGACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4215491‑4215342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgATGAGGGCTTCAACAGCTTTACGGAACGGGTGTGCCTTGAAGGCAAGCTTCCGTGCGAAACCATCCTGGAAAAATGCACGTGCTTCTACCTGAGGATCAACCTCGAGAAT > NC_002947/4215376‑4215485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |