| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4352363 | 61 (1.240) | 6 (0.130) | 4/244 | NT | 9.2% | coding (21/303 nt) | PP_3825 | hypothetical protein |
| ? | NC_002947 | = 4352407 | 60 (1.280) | coding (65/303 nt) | PP_3825 | hypothetical protein | |||||
GACCACATCCAGGCGGTTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4352216‑4352363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGC < NC_002947/4352407‑4352263 GACCACATCCAGGCGGTTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGC > 4:16439/1‑148GACCACATCCAGGCGATTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGC < 1:212106/148‑1 TGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTC > 7:291216/1‑149 TACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCG > 6:99361/1‑149 TACGCCCGGCGATCAACACGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCG > 2:56472/1‑149 GGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCCGCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGT < 5:99361/149‑1 GGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGT < 8:291216/149‑1 ATCAACACGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACGCACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTA < 1:56472/149‑1 CAGCGCTGGGAGCTCTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTTGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAATGATTCCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGG < 5:275892/149‑1 AGCGCTGGTAGCACTGGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCTCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGG < 3:225173/148‑1 AGCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGG > 4:75721/1‑149 GCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCTCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGC < 8:100010/149‑1 GCGCTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGC > 4:136108/1‑149 GACCACATCCAGGCGGTTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4352216‑4352363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGGGAGCACTCGATGACG‑ACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGC < NC_002947/4352407‑4352263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |