New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4691165	59 (1.200)	4 (0.080)	4/246	NT	6.4%	coding (299/474 nt)	PP_4151	excisionase domain‑containing protein
	?	NC_002947	= 4691214	60 (1.260)					coding (348/474 nt)	PP_4151	excisionase domain‑containing protein

GCGCCAGGTTGTTGAAGTACCTACTTTCGCCCTACGCCTATTCGGCGAAATTCTCAGCGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4691016‑4691165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTTTACCAAGTGCGGCCGGGAGACGTTAAGCAGGTCTGCTGCTTCCTGGGTAGTTAGTTCGGCGTGGATTGGAACGACTTTGACTGAGTTACCCAAGGCCAGTTCGCT  <  NC_002947/4691214‑4691071                                                                                                                                                                                                                                                                                                        GCGCCAGGTTGTTGAAGTACCTACTTTCGCCCTACGCCTATTCGGCGAAATTCTCAGCGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGC                                                                                                                                                   >  8:157107/1‑149                                 TACGCCTATTCGGCGAAATTCTCAGCGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGG                                                                                                                                                    >  3:87684/1‑116                                 TACGCCTATTCGGCGAAATTCTCAGCGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGG                                                                                                                                                    <  4:87684/116‑1                                          TCGGCGAAATTCTCAGCGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGCCTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTT                                                                                                           >  8:33904/1‑148                                                          CGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGCCTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTTTACCAAGTGCGGCCGGG                                                                                          <  7:33904/149‑1                                                                                                TCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGCCTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTTTACCAAGTGCGGCCGGGA                                                                                         <  1:235843/112‑1                                                                                                TCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGCCTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTTTACCAAGTGCGGCCGGGA                                                                                         >  2:235843/1‑112                                                                                                                                                  CGGCCTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTTTACCAAGTGCGGCCGGGAGACGTTAAGCAGGTCTGCTGCTTCCTGGGTAGTTAGTTCGGCGTGGATTGGAACGACTTTGACTGAGTTACCCAAGGCCAGTTCGCT  <  8:220459/149‑1                                                                                                                                                                                                                                                                                                        GCGCCAGGTTGTTGAAGTACCTACTTTCGCCCTACGCCTATTCGGCGAAATTCTCAGCGAACTGGCCTTGGGTAACTCAGTCAAAGTCGTTCCAATCCACGCCGAACTAACTACCCAGGAAGCAGCAGACCTGCTTAACGTCTCCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4691016‑4691165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTGTCTTGGTGTGCGGAATCACCGCTTCGTCGAGCAGCTTTACCAAGTGCGGCCGGGAGACGTTAAGCAGGTCTGCTGCTTCCTGGGTAGTTAGTTCGGCGTGGATTGGAACGACTTTGACTGAGTTACCCAAGGCCAGTTCGCT  <  NC_002947/4691214‑4691071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.