| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4733550 = | 66 (1.340) | 5 (0.110) | 5/242 | NT | 7.6% | coding (2085/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
| ? | NC_002947 | 4733587 = | 60 (1.290) | coding (2048/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 | |||||
CCTACATTCCGTTGCAGAACCTGTTCCCAGGCCAGCCACGTTTCGATCTGTACGATTCGTTCCTGTCCGAGGAAGCGGTACTGGCCTTCGAATACGGCTACTCCACCACCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4733698‑4733550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcggcATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGTGCAACACCGCG > NC_002947/4733587‑4733730 CCTACATTCCGTTGCAGAACCTGTTCCCAGGCCAGCCACGTTTCGATCTGTACGATTCGTTCCTGTCCGAGGAAGCGGTACTGGCCTTCGAATACGGCTACTCCACCACCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGC < 7:218544/149‑1 CCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGG > 1:205241/1‑145 CCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGG < 2:205241/145‑1 ATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATa > 1:111703/1‑146 GCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGG > 7:68166/1‑149 GGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGT < 8:68166/149‑1 CATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGTGCAACACCGCG < 1:274121/145‑1 CATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGTGCAACACCGCG > 2:274121/1‑145 CCTACATTCCGTTGCAGAACCTGTTCCCAGGCCAGCCACGTTTCGATCTGTACGATTCGTTCCTGTCCGAGGAAGCGGTACTGGCCTTCGAATACGGCTACTCCACCACCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4733698‑4733550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcggcATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGTGCAACACCGCG > NC_002947/4733587‑4733730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |