| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5036750 | NA (NA) | 3 (0.070) | 3/238 | NT | NA | coding (241/336 nt) | PP_4442 | transposase |
| ? | NC_002947 | = 5036798 | NA (NA) | coding (289/336 nt) | PP_4442 | transposase | |||||
CGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5036595‑5036750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatggcaAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCGAATGCCGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCGGT < NC_002947/5036798‑5036652 CGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGACAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGTCTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGC < 1:210891/149‑1 TTCGGTGCGGCGAAGCCGCACTGCGCTTATCTCTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCAGGCATTCGCCATGG > 8:85946/1‑149 TCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTTGTGCACGACGGCGTGGGCGTCTGGCTTTCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGG < 5:8278/148‑1 GTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCAT < 5:255233/143‑1 GTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCAT > 6:255233/1‑143 TGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGG < 5:13615/149‑1 ACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCC > 3:118025/1‑130 ACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCC < 4:118025/130‑1 GGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCGAATGCCGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCG > 3:136504/1‑149 GCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCGAATGCCGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCG < 4:136504/148‑1 CAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCGAATGCCGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCGGT > 6:259133/1‑149 CGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5036595‑5036750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatggcaAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCGAATGCCGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCGGT < NC_002947/5036798‑5036652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |