New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5261211	56 (1.130)	4 (0.090)	3/240	NT	7.2%	coding (390/825 nt)	PP_4637	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
	?	NC_002947	= 5261242	50 (1.080)					coding (359/825 nt)	PP_4637	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein

AGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5261062‑5261211 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggcgTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGAAGAAGCTGATCGCCACGTACTTCGGTGGCCTGGAAGGCAACCT  <  NC_002947/5261242‑5261095                                                                                                                                                                                                                                                                                                            AGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGC                                                                                                                                                       >  4:119595/1‑149  GGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGC                                                                                                                                                       >  1:88056/1‑148     CATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGTT                                                                                                                                                    >  5:134544/1‑148                                CGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGTTGAATGGGTGCAGATCGATGAACCCATCC                                                                                                                        >  5:232421/1‑149                                            CCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGC                                                                                                              <  6:232421/147‑1                                            CCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGC                                                                                                              <  5:104838/147‑1                                               GGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGC                                                                                                         <  6:134544/149‑1                                                                              CAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCG                                                                                                                                                      <  6:192462/73‑1                                                                              CAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCG                                                                                                                                                      >  5:192462/1‑73                                                                                                                                                CTGGGCGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGAAGAAGCTGATCGCCACGTACTTCGGTAGCCTGGAAGG        <  7:297016/149‑1                                                                                                                                                   GGCGGTGACTCGGTGCAGCACGACGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGACAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGAAGAAGCTGATCGCCACGTACTTCGGTGGCCTGGAAGGCAA     <  8:206569/149‑1                                                                                                                                                    GCGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCC                                                               <  4:214587/90‑1                                                                                                                                                    GCGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCC                                                               >  3:214587/1‑90                                                                                                                                                     CGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGAAGAAGCTGATCGCCACGTACTTCGGTGGCCTGGAAGGCAACC   >  6:184981/1‑149                                                                                                                                                     CGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGA                                             >  4:303607/1‑107                                                                                                                                                     CGTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGA                                             <  3:303607/107‑1                                                                                                                                                      GTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGAAGAAGCTGATCGCCACGTACTTCGGTGGCCTGGAAGGCAACCT  >  6:252197/1‑149                                                                                                                                                                                                                                                                                                            AGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5261062‑5261211 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggcgTTGAATGGGTGCAGATCGATGAACCCATCCTCGCCCAGGCGCTGCCCCAGGACTGGAAAAACGCCTATGAACGCGTCTACAACATCCTTCAACGCGCACCGTTGAAGAAGCTGATCGCCACGTACTTCGGTGGCCTGGAAGGCAACCT  <  NC_002947/5261242‑5261095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.