New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5560048	54 (1.090)	5 (0.110)	5/246	NT	8.5%	coding (449/1188 nt)	hisZ	ATP phosphoribosyltransferase regulatory subunit
	?	NC_002947	= 5560078	56 (1.180)					coding (419/1188 nt)	hisZ	ATP phosphoribosyltransferase regulatory subunit

CCTGCACTTCATCGACAGCCTTGCGTTGCATGGCGTCGAACAGCTGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5559899‑5560048 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGCAACTGGCCGATGTGCCGGATGTTCACATGGACCTGGGCCATGTCGGCATCTACCGCGGCCTGGCCCGTGCCGCCGGTCTGTCCGGCGCGGTCGAACAGCAGCTGTTCGACGC  <  NC_002947/5560078‑5559931                                                                                                                                                                                                                                                                                                            CCTGCACTTCATCGACAGCCTTGCGTTGCATGGCGTCGAACAGCTGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGC                                                                                                                                                       <  7:168026/149‑1                                   GTCGAACAGCTGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCGATGTCGAAGTCATCAGCCTGATGCTCGCCACGC                                                                                                                     >  1:68117/1‑149                                      GAACAGCTGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCGATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGC                                                                                                                  <  2:68117/149‑1                                           GCTGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCGATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGCAACTG                                                                                                             <  8:38118/149‑1                                             TGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCGATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGCAAC                                                                                                               >  7:289685/1‑145                                             TGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCGATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGCAAC                                                                                                               <  8:289685/145‑1                                                                                                                                                      GATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGCAACTGGCCGATGTGCCGGATGTTCACATGGACCTGGGCCATGTCGGCATCTACCGCGGCCTGGCCCGTGCCGCCGGTCTGTCCGGCGCGGTCGAACAGCAGCTGTTCGACGC  <  2:273713/149‑1                                                                                                                                                                                                                                                                                                            CCTGCACTTCATCGACAGCCTTGCGTTGCATGGCGTCGAACAGCTGCTGTTCGACCGCGCCGGACAGACCGGCGGCACGGGCCAGGCCGCGGTAGATGCCGACATGGCCCAGGTCCATGTGAACATCCGGCACATCGGCCAGTTGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5559899‑5560048 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgATGTCGAAGTCATCAGCCTGATGCTCGCCACGCTGCAACTGGCCGATGTGCCGGATGTTCACATGGACCTGGGCCATGTCGGCATCTACCGCGGCCTGGCCCGTGCCGCCGGTCTGTCCGGCGCGGTCGAACAGCAGCTGTTCGACGC  <  NC_002947/5560078‑5559931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.