New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5583793	54 (1.090)	4 (0.090)	4/242	NT	6.7%	coding (1939/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	= 5583844	60 (1.290)					coding (1888/2259 nt)	parC	DNA topoisomerase IV subunit A

TTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5583659‑5583793 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  <  NC_002947/5583844‑5583702                                                                                                                                                                                                                                                                                        TTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGG                                                                                                                                   >  8:119295/1‑149                                               CCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGAC                                                                                     <  7:119295/149‑1                                                            CCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTG                                                                               <  3:118092/142‑1                                                            CCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTG                                                                               >  4:118092/1‑142                                                                                                                                  CTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  <  4:48884/149‑1                                                                                                                                  CTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  <  5:204458/149‑1                                                                                                                                      TCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTC                                           <  6:290137/104‑1                                                                                                                                                                                                                                                                                        TTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5583659‑5583793 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  <  NC_002947/5583844‑5583702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.