| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5987288 = | 58 (1.170) | 5 (0.100) | 4/248 | NT | 8.5% | coding (370/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
| ? | NC_002947 | 5987333 = | 51 (1.070) | coding (415/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter | |||||
GCGGCCAGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5987439‑5987288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTGGTACCGCTGCTGGCCGCCAGTGGCCCA > NC_002947/5987333‑5987449 GCGGCCAGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGATGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAG < 3:172269/149‑1GCGGCCAGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAG < 3:65340/149‑1 CCAGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGC < 5:249058/147‑1 CCAGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGC > 6:249058/1‑147 AGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCC > 1:276676/1‑146 GGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGG > 5:161863/1‑88 GGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGG < 6:161863/88‑1 TCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCCGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTGGTACCGCTGC > 4:301623/1‑149 TCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCCGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTGGTACCGCTGC > 5:270563/1‑149 CCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCCGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTG > 7:16/1‑133 CCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCCGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTG < 8:16/133‑1 AGGCCAAGGGCGGTGGACGAAAGCGCCAGGCCGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTGGTACCGCTGCTGGCCGCCAGTGGCCCA < 6:270563/149‑1 GCGGCCAGCAGCGGTACCAAGGCGATCAGCGGGATCGCGGCGATGTCCTGGAACAACAGGATGGCGAATGCCAGACGGCCGTGCGGTGCATTGAGCTGCTTGCTCTCGGCCAGGCTCTGCAGGCCAAGGGCGGTGGACGAAAGCGCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5987439‑5987288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGAGAGCAAGCAGCTCAATGCACCGCACGGCCGTCTGGCATTCGCCATCCTGTTGTTCCAGGACATCGCCGCGATCCCGCTGATCGCCTTGGTACCGCTGCTGGCCGCCAGTGGCCCA > NC_002947/5987333‑5987449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |