| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6011868 = | 60 (1.220) | 4 (0.080) | 4/246 | NT | 6.3% | coding (720/2010 nt) | rep | single‑stranded DNA dependent ATPase |
| ? | NC_002947 | 6011913 = | 62 (1.310) | coding (765/2010 nt) | rep | single‑stranded DNA dependent ATPase | |||||
TCAACACGTTGGCGCAGCGCAGGATGCGGCTGGTGGAACGGTAGTTCTGTTCGAGCATGACGATCTTCAGGGAGGGGTAGTCCTCCTTGAGCAGCATCAGGTTCTCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6012019‑6011868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGTGTTGATCGCCAACAATCCGCATGCGTTCGAAAAGCAGCTGTGGAG > NC_002947/6011913‑6012059 TCAACACGTTGGCGCAGCGCAGGATGCGGCTGGTGGAACGGTAGTTCTGTTCGAGCATGACGATCTTCAGGGAGGGGTAGTCCTCCTTGAGCAGCATCAGGTTCTCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCG < 2:98221/149‑1TCAACAAGTTGGCGCAGCGGAGGATGCGGCTTGTGGAACGGTAGTTGTGTTCGAGCATGAGGATCTTCAGGGAGGGGTAGTCCTCCTTGAGCAGCATCAGGTTCTCGGGGCGCGCACCACGGCAGGCGTAGATCGACTGGTCGTCGTCG < 6:193379/149‑1 CAACACGTTGGCGCAGCGCAGGATGCGGCTGGTGGAACGGTAGTTCTGTTCGAGCATGACGATCTTCAGGGAGGGGTAGTCCTCCTTGAGCAGCATCAGGTTCTCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGC > 1:97435/1‑149 CTCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGCCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGC > 7:255389/1‑128 CTCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGCCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGC < 8:255389/128‑1 TCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGCCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACG > 6:306205/1‑149 GGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGCCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGT < 5:306205/148‑1 GCCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGTGTTGATCGCCAACAATCCGCATGCGTTCGAAAAGCAGCTGTG > 1:89587/1‑148 CCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGTGTTGATCGCCAACAATCCGCATGCGTTCGAAAAGCAGCTGTGGA < 2:265002/149‑1 CCCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGTGTTGATCGCCAACAATCCGCATGCGTTCGAAAAGCAGCTGTG > 2:4537/1‑147 CCCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGTGTTGATCGCCAACAATCCGCATGCGTTCGAAAAGCAGCTGTGGAG > 7:185449/1‑149 TCAACACGTTGGCGCAGCGCAGGATGCGGCTGGTGGAACGGTAGTTCTGTTCGAGCATGACGATCTTCAGGGAGGGGTAGTCCTCCTTGAGCAGCATCAGGTTCTCGGGGCGCGCACCACGCCAGGCGTAGATCGACTGGTCGTCGTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6012019‑6011868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccCGAGAACCTGATGCTGCTCAAGGAGGACTACCCCTCCCTGAAGATCGTCATGCTCGAACAGAACTACCGTTCCACCAGCCGCATCCTGCGCTGCGCCAACGTGTTGATCGCCAACAATCCGCATGCGTTCGAAAAGCAGCTGTGGAG > NC_002947/6011913‑6012059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |