New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6079724 =	61 (1.240)	4 (0.090)	4/242	NT	6.8%	coding (138/399 nt)	PP_5331	acyl‑CoA thioesterase
	?	NC_002947	6079785 =	52 (1.110)					coding (199/399 nt)	PP_5331	acyl‑CoA thioesterase

CCTCGACCATCATCTGGATCGAGCTGCGGCCGATTTCCAGGGTCTGGGTATAGAAAGACAGCTGTGCGCCGACCGCGACGGGTACCAGGAAGGCCATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6079875‑6079724 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggccTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTC  >  NC_002947/6079785‑6079931                                                                                                                                                                                                                                                                                                              cctagcCCATCATCTTGATCGAGCTGCGGCCTATTTCCTGGGTCTGGGTATCTAAAGACAGCTGTGCCCCGACCGCGACGGGTACCCGTAAGGCATTGCGGTCGATGGCGACGGGGGCTACGCGGCCGCCGGCGACACGGCTGGCCATG                                                                                                                                                         <  6:216545/143‑1     GACCATCATCTGGATCGAGCTGCGGCCGATTTCCAGGGTCTGGGTATAGAAAGACAGCTGTGGGCCGACCGCGACGGGTACCAGGAAGGCCATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGC                                                                                                                                                       <  7:159967/147‑1                                                                                          AAGGCCATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGCCTTCCTGGTACCCGTCGCGGTCGGCGCATAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCG                                                                                        <  1:201689/124‑1                                                                                          AAGGCCATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCG                                                                                        >  2:201689/1‑124                                                                                               CATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCGGCCGCAGCTCGATCCAGATGAT                                                                  <  5:320961/141‑1                                                                                               CATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCGGCCGCAGCTCGATCCAGATGAT                                                                  >  6:320961/1‑141                                                                                                                                                   ATGGCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCAATACCCAGCACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGG       >  1:82642/1‑149                                                                                                                                                       CCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTC  <  5:118981/149‑1                                                                                                                                                       CCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCCGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTC  <  8:135902/149‑1                                                                                                                                                                                                                                                                                                              CCTCGACCATCATCTGGATCGAGCTGCGGCCGATTTCCAGGGTCTGGGTATAGAAAGACAGCTGTGCGCCGACCGCGACGGGTACCAGGAAGGCCATGCGGTCGATGGCGACGGTGGCTACGCGGCCGCCGGCGACACGGCTGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6079875‑6079724 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggccTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAG‑ACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTC  >  NC_002947/6079785‑6079931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.