New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1067194 =	54 (1.090)	3 (0.060)	3/248	NT	5.4%	coding (435/888 nt)	PP_0925	hypothetical protein
	?	NC_002947	1067235 =	52 (1.090)					coding (476/888 nt)	PP_0925	hypothetical protein

CTGTCGGGCTGCAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTATGTGCTCGCGGCGC  >  NC_002947/1067048‑1067336                                                                                                                                                   |                                                                                                                                               cggccaggcgcactcctgcccaacgccatacaaccaggcggtcagcgccgcgagcacatacaaatcctccagcgaacggaaaggcttcacgtaggcatcccagccgtcaccggccagcaactcgcacgatgcctgctccagcagcag                                                                                                                                                >  3:232721‑M1/147‑147 (MQ=255)         cTGCAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGc                                                                                                                                      <  3:240228/149‑1 (MQ=255)            cAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCt                                                                                                                                        <  3:192976/144‑1 (MQ=255)            cAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCt                                                                                                                                        >  4:192976/1‑144 (MQ=255)            cAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGc                                                                                                                                   >  1:175531/1‑149 (MQ=255)            cAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGc                                                                                                                                   >  5:307077/1‑149 (MQ=255)            cAAAGACTTCGTTACCGCAGGCATGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGCAGCGGCTGGCGCGGCACCGCAACTGAGCCGGGCGGTGGTCTATCCGGGGGAGCCGGGGGTGCAACTGGCGCCATTGCCGACCATGCCGc                                                                                                                                   >  4:253253/1‑149 (MQ=255)             aaaGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCt                                                                                                                                  >  3:257265/1‑149 (MQ=255)                   ttCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGcc                                                                                                                            >  2:7596/1‑149 (MQ=255)                     cGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCg                                                                                                                           <  2:228075/148‑1 (MQ=255)                           cGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCg                                                                                                                    >  5:8700/1‑149 (MQ=255)                                        ggtcagcgccgcgagcacatacaaatcctccagcgaacggaaaggcttcacgtaggcatcccagccgtcaccggccagcaactcgcacgatgcctgctccagcagcaGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGgct                                                                                                       >  4:2815‑M1/108‑149 (MQ=255)                                            aGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGgctgctg                                                                                                   <  1:7596/149‑1 (MQ=255)                                                gTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGctgctgctg                                                                                                >  5:21225/1‑148 (MQ=255)                                                gTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGctgctgctg                                                                                                >  5:111004/1‑148 (MQ=255)                                                 ttGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGa                                                                                              <  7:43193/149‑1 (MQ=255)                                                    cTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGc                                                                                            <  4:257265/148‑1 (MQ=255)                                                       gtggCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAg                                                                                          <  1:80922/147‑1 (MQ=255)                                                            ggcgCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGa                                                                                                                                <  1:6152/104‑1 (MQ=255)                                                            ggcgCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGa                                                                                                                                >  2:6152/1‑104 (MQ=255)                                                               gcgTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGc                                                                                 >  3:74668/1‑148 (MQ=255)                                                                      gAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCt                                                                         <  3:220943/149‑1 (MQ=255)                                                                         gCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGc                                                                      <  2:175531/149‑1 (MQ=255)                                                                          gaacggaaaggcttcacgtaggcatcccagccgtcaccggccagcaactcgcacgatgcctgctccagcagcaGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCAcggccggc                                                                                                        >  6:123337‑M1/74‑114 (MQ=255)                                                                          gaacggaaaggcttcacgtaggcatcccagccgtcaccggccagcaactcgcacgatgcctgctccagcagcaGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCAcggccggc                                                                                                        <  5:123337‑M1/41‑1 (MQ=255)                                                                              tGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGt                                                                  >  8:184610/1‑148 (MQ=255)                                                                                gcgcGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCAcg                                                                                                              >  1:103506/1‑102 (MQ=255)                                                                                gcgcGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCAcg                                                                                                              <  2:103506/102‑1 (MQ=255)                                                                                 cgcgGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACg                                                              <  4:80575/149‑1 (MQ=255)                                                                                    ggCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCt                                                           <  7:170520/149‑1 (MQ=255)                                                                                      cACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGCTGCTGGCCGGTGACGGCTgg                                                         <  6:21225/149‑1 (MQ=255)                                                                                            aaCTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGcc                                                   <  7:184610/149‑1 (MQ=255)                                                                                            aaCTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGcc                                                   >  1:6907/1‑149 (MQ=255)                                                                                               tGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCTGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTAc                                                >  5:18239/1‑149 (MQ=255)                                                                                                    cTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTg                                             >  5:86093/1‑147 (MQ=255)                                                                                                    cTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTg                                             >  6:2883/1‑147 (MQ=255)                                                                                                    cTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTg                                             >  2:72572/1‑147 (MQ=255)                                                                                                         ggtggtCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGa                                                                               <  7:42995/108‑1 (MQ=255)                                                                                                         ggtggtCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGa                                                                               >  8:42995/1‑108 (MQ=255)                                                                                                          gtggtCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCttt                                     >  2:13172/1‑149 (MQ=255)                                                                                                             gtCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCg                                  >  2:119429/1‑149 (MQ=255)                                                                                                               cTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGtt                                >  3:133936/1‑149 (MQ=255)                                                                                                                  tCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGc                             >  3:253938/1‑149 (MQ=255)                                                                                                                    ccGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTg                                                          >  6:108140/1‑118 (MQ=255)                                                                                                                    ccGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTg                                                          <  5:108140/118‑1 (MQ=255)                                                                                                                    ccGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTcc                                   >  4:104081/1‑141 (MQ=255)                                                                                                                    ccGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTcc                                   <  3:104081/141‑1 (MQ=255)                                                                                                                      ggggAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTgga                         <  6:325436/149‑1 (MQ=255)                                                                                                                      ggggAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTgga                         <  6:8700/149‑1 (MQ=255)                                                                                                                      ggggAGCCGGGGGTGACACTGGACCCCTTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCAGCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTgga                         <  8:287553/149‑1 (MQ=255)                                                                                                                                gggTGAGATTGGAGGCATTGCCTACCTTTCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCTGGCATCGTGCGAGTTGCTGGCCGGTGAGGTCTTGGATGCCTACGTGAAGCCTTTACGTTGGGTGGAGGTTTTGttt               <  4:74668/149‑3 (MQ=255)                                                                                                                                gggTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTAt               <  6:86093/149‑1 (MQ=255)                                                                                                                                gggTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTAt               <  2:6907/149‑1 (MQ=255)                                                                                                                                 ggTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTAtg              <  4:253938/149‑1 (MQ=255)                                                                                                                                       acTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGa                                                                               <  7:277104/78‑1 (MQ=255)                                                                                                                                       acTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGa                                                                               >  8:277104/1‑78 (MQ=255)                                                                                                                                          ggAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTATGTGCTCgcgg     >  7:252045/1‑149 (MQ=255)                                                                                                                                             gCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTATGTGCTCGCGgcgc  <  1:72572/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                               CTGTCGGGCTGCAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCCATTGCCGACCCTGCCGCTGATGCCGGAAGTCGGGCACGGCCGGCTGCTGCTGGAGCAGGCATCGTGCGAGTTGCTGGCCGGTGACGGCTGGGATGCCTACGTGAAGCCTTTCCGTTCGCTGGAGGATTTGTATGTGCTCGCGGCGC  >  NC_002947/1067048‑1067336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.