New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1670783 | 47 (0.950) | 3 (0.060) | 3/242 | NT | 5.2% | coding (112/408 nt) | PP_1466 | acyl‑CoA thioesterase |
? | NC_002947 | = 1670833 | 64 (1.370) | coding (162/408 nt) | PP_1466 | acyl‑CoA thioesterase |
TTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACGGTGATCA > NC_002947/1670637‑1670930 | tttttGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCAcc > 2:112785/1‑149 (MQ=255) ttttGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCTCCACAACACCCTGTTCGGCGGCACCGCcctggc < 1:41930/149‑1 (MQ=255) ttttGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCcctggc < 2:127705/149‑1 (MQ=255) tGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCcctggcct < 5:298363/148‑1 (MQ=255) aaaCCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCtgga > 1:268636/1‑149 (MQ=255) aaaCCCCGAAAATGAGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCcctggcctgg < 7:266900/148‑1 (MQ=255) aaCCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCtggat < 5:29303/149‑1 (MQ=255) ccccGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCtggatgg < 1:112785/149‑1 (MQ=255) aaaaTGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGaa < 3:67873/149‑1 (MQ=255) aaaTGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAg < 8:275262/149‑1 (MQ=255) aaTGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAgt > 5:293734/1‑149 (MQ=255) tgATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTc < 1:244369/148‑1 (MQ=255) tGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCAgaaacgcgtggcagcgatgaacgacacttcgtc > 8:149714‑M1/1‑116 (MQ=255) cATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCg > 3:173485/1‑149 (MQ=255) acgacCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGc > 8:26482/1‑149 (MQ=255) cAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCtg < 2:75430‑M2/149‑3 (MQ=255) cAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCtg > 1:75430‑M2/1‑147 (MQ=255) cAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCAc < 2:181579/131‑1 (MQ=255) cAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCAc > 1:181579/1‑131 (MQ=255) cgccgcACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCAgaaacgcgtggcagcgatgaacgacacttcgtccatccaggccagggcggtgccgccgaacagg < 7:149714‑M1/149‑65 (MQ=255) gccgcACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTg < 4:173485/149‑1 (MQ=255) cgcACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCAgaaacgcgtggcagcgatgaacgacacttcgtccatccaggccagggcggtgccgccgaacagggtg < 8:172552‑M1/149‑68 (MQ=255) aaCTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTCCCGTTGGTGACCgtg > 1:106295/1‑149 (MQ=255) aCTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCgtgt < 7:26482/149‑1 (MQ=255) tCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCt < 1:2114/147‑1 (MQ=255) ccGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCa > 8:52150/1‑149 (MQ=255) ccGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCa > 6:132381/1‑149 (MQ=255) ccGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCa > 4:177508/1‑149 (MQ=255) ccGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCa > 2:239349/1‑149 (MQ=255) gcgTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATc < 2:268636/149‑1 (MQ=255) cAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTc > 4:78184/1‑148 (MQ=255) aaGGCGGTGTTCGCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCCCATCGATTTc > 5:23946/1‑147 (MQ=255) ggCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGc < 3:78184/149‑1 (MQ=255) ttCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGa < 6:293734/148‑1 (MQ=255) ccccAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTc > 2:208964/1‑149 (MQ=255) aaTACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCcggc < 1:208964/149‑1 (MQ=255) caccaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTc > 4:18196/1‑127 (MQ=255) caccaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTc < 3:18196/127‑1 (MQ=255) caccaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCt > 3:308251/1‑149 (MQ=255) caccaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCt < 7:52150/149‑1 (MQ=255) caccaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCt > 2:90844/1‑149 (MQ=255) accaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATTGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGACGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGAGGGCTc > 1:71753/1‑149 (MQ=255) accaaccaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTc > 2:54650/1‑149 (MQ=255) accaccaCAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGAtc < 4:249328/149‑1 (MQ=255) acaacaCCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAg < 2:183279/149‑1 (MQ=255) caacaCCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCCCCCGATTCCGGCGGGCTCGATCGTCGAGc > 8:224221/1‑149 (MQ=255) cacCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCtgccgccgaacagggtgttgtggtggttggtggtattggggaacaccgccttggtaacgcgggtcaccgacagttcggtgcg < 8:172552‑M2/149‑83 (MQ=255) ccTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCtgccgccgaacagggtgttgtggtggttggtggtattggggaacaccgccttggtaacgcgggtcaccgacagttcggtgcggcg < 7:149714‑M2/149‑86 (MQ=255) ccTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCtggtgg > 8:8759/1‑149 (MQ=255) ccTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCtggtgg < 4:308251/149‑1 (MQ=255) cTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTggg < 5:132381/149‑1 (MQ=255) tGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCtggtgg > 4:199973/1‑147 (MQ=255) tGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCtggtgg < 3:199973/147‑1 (MQ=255) cggcggCACCGCCCTGGCCTGGATGGACGAAGTGTGGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGGGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACg < 8:20156/148‑1 (MQ=255) gcggcACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACGGt > 2:14992/1‑148 (MQ=255) cAgaaacgcgtggcagcgatgaacgacacttcgtccatccaggccagggcggtgccgccgaacagggtgttgtggtggttggtggtattggggaacaccgccttggtaacgcgggtcaccgacagttcggtgcggcgctggatttcctg > 1:75430‑M1/1‑2 (MQ=255) cAgaaacgcgtggcagcgatgaacgacacttcgtccatccaggccagggcggtgccgccgaacagggtgttgtggtggttggtggtattggggaacaccgccttggtaacgcgggtcaccgacagttcggtgcggcgctggatttcctg < 2:75430‑M1/149‑148 (MQ=255) cACCGGCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACGGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACGGTGATCa < 2:106295/149‑1 (MQ=255) cACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACGGTGATc > 4:77925/1‑148 (MQ=255) cACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACGGTGATc > 7:289475/1‑148 (MQ=255) | TTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGTTCGGCGGCACCGCCCTGGCCTGGATGGACGAAGTGTCGTTCATCGCTGCCACGCGTTTCTGCCGCCTGCCGTTGGTGACCGTGTCTACCGACCGCATCGATTTCAAGCACCCGATTCCGGCGGGCTCGATCGTCGAGCTGGTGGGGACGGTGATCA > NC_002947/1670637‑1670930 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |