New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1950623	39 (0.790)	4 (0.090)	4/240	NT	9.8%	coding (823/1788 nt)	asnB	asparagine synthetase
	?	NC_002947	= 1950686	37 (0.800)					coding (760/1788 nt)	asnB	asparagine synthetase

TGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCA  >  NC_002947/1950479‑1950767                                                                                                                                                 |                                                                                                                                                 tGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGccgccg                                                                                                                                              <  3:206988/149‑1 (MQ=255)                 gATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCca                                                                                                                              >  3:239899/1‑149 (MQ=255)                       gTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCacccgcgacgccgtagccatccgcc                                                                                                                         >  4:152934‑M1/1‑123 (MQ=255)                       gTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGa                                                                                                                        >  6:243469/1‑149 (MQ=255)                           gAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGc                                                                                                                    >  5:116199/1‑149 (MQ=255)                                cTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGccgccg                                                                                                                                              >  3:5328/1‑118 (MQ=255)                                cTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGccgccg                                                                                                                                              <  4:5328/118‑1 (MQ=255)                                 tGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCca                                                                                                                              <  8:207538/133‑1 (MQ=255)                                 tGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCca                                                                                                                              >  7:207538/1‑133 (MQ=255)                                   gAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCg                                                                                                              >  6:256987/1‑147 (MQ=255)                                   gAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGtt                                                                                                            >  7:228335/1‑149 (MQ=255)                                    aaCTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCACGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCAACATCGACGGCTGCCCGTTg                                                                                                           <  1:126673/149‑1 (MQ=255)                                     aCTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTgg                                                                                                          <  1:1729/149‑1 (MQ=255)                                       tcgtcgCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCacccgcgacgccgtagccatccgccaacgggcagccgtcgat                                                                                                        >  6:170803‑M1/1‑107 (MQ=255)                                            gccgcGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATg                                                                                                    <  6:116199/148‑1 (MQ=255)                                                           ggCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCggg                                                                                    >  4:224550/1‑149 (MQ=255)                                                                 ttCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTg                                                                                                           >  6:30126/1‑120 (MQ=255)                                                                 ttCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTg                                                                                                           <  5:30126/120‑1 (MQ=255)                                                                 ttCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTggcgt                                                                              <  5:151029‑M2/149‑6 (MQ=255)                                                                    aaaGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCacccgcgacgccgtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcga                                                                           <  5:170803‑M1/149‑72 (MQ=255)                                                                    aaaGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTggcgtc                                                                             <  5:198088‑M2/147‑7 (MQ=255)                                                                     aaGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCacccgcgacgccgtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgat                                                                          <  3:152934‑M1/149‑73 (MQ=255)                                                                     aaGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAg                                                                          >  5:254677/1‑149 (MQ=255)                                                                          gATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCAcgc                                                                     >  5:67566/1‑149 (MQ=255)                                                                              gagaAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCggg                                                                  <  2:133539/148‑1 (MQ=255)                                                                               agaAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTggc                                                                                >  4:244115‑M2/1‑130 (MQ=255)                                                                               agaAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGggtg                                                                <  6:151029/149‑1 (MQ=255)                                                                               agaAGGTCGACAGGTCGTCAAAGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTggc                                                                                <  3:244115‑M2/133‑4 (MQ=255)                                                                                 aaGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGggtggt                                                              >  1:139060/1‑149 (MQ=255)                                                                                   ggTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTAC‑GCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCa                                                           <  2:202121/149‑1 (MQ=255)                                                                                    gTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTc                                                             >  3:54649/1‑147 (MQ=255)                                                                                    gTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCa                                                           <  3:224550/149‑1 (MQ=255)                                                                                       cacacGTAGTCTACGCGCACTTCGCGCAGCAAGCCGACCAGCAGGGTGGTAGCGCCGCCGCCGGACAGCAACACACCGACTTCGACGCCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGGGGTCCAGc                                                         <  8:298518/147‑1 (MQ=255)                                                                                         cAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCtt                                                      <  6:254677/149‑1 (MQ=255)                                                                                           ggTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTcc                                                    <  8:228335/149‑1 (MQ=255)                                                                                                tcAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTc                                               <  6:198088/149‑1 (MQ=255)                                                                                                tcAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTc                                               >  4:123629/1‑149 (MQ=255)                                                                                                  aaCGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCa                                             <  5:243469/149‑1 (MQ=255)                                                                                                        cACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCggg                                                                  >  8:80390/1‑122 (MQ=255)                                                                                                        cACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCggg                                                                  <  7:80390/122‑1 (MQ=255)                                                                                                                        ccGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTgggg                       >  2:144392/1‑149 (MQ=255)                                                                                                                           aCCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGcc                    >  1:227670/1‑149 (MQ=255)                                                                                                                              agcagGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTa                 <  6:151543/149‑1 (MQ=255)                                                                                                                              agcagGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTa                 <  4:239899/149‑1 (MQ=255)                                                                                                                                 agGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTg              <  1:144392/149‑1 (MQ=255)                                                                                                                                 agGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTg              <  6:67566/149‑1 (MQ=255)                                                                                                                                   gCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGATGGGGGCCGTAGTGCa            <  4:54649/149‑1 (MQ=255)                                                                                                                                     tGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGt          >  5:139371/1‑149 (MQ=255)                                                                                                                                         aTCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctccatcggctt      <  3:152934‑M2/149‑78 (MQ=255)                                                                                                                                          tCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctccatcggcttt     <  5:170803‑M2/149‑79 (MQ=255)                                                                                                                                          tCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTg                          <  6:16473/128‑1 (MQ=255)                                                                                                                                          tCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTg                          >  5:16473/1‑128 (MQ=255)                                                                                                                                            gACGCCacccgcgacgccgtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctccatcggcttt     <  5:198088‑M1/147‑142 (MQ=255)                                                                                                                                             aCGCCacccgcgacgccgtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctccatcggctttgaa  <  5:151029‑M1/149‑145 (MQ=255)                                                                                                                                               gCCacccgcgacgccgtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggctttgacgacctgtcgaccttct                <  3:244115‑M1/133‑131 (MQ=255)                                                                                                                                               gCCacccgcgacgccgtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttct                >  4:244115‑M1/1‑3 (MQ=255)                                                                                                                                                 |                                                                                                                                                 TGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCA  >  NC_002947/1950479‑1950767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.