New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2120463 =	41 (0.830)	3 (0.060)	3/240	NT	6.4%	coding (1614/2355 nt)	PP_1885	hypothetical protein
	?	NC_002947	2120512 =	49 (1.060)					coding (1663/2355 nt)	PP_1885	hypothetical protein

ACGGCACGGCCGGCATGCGCATCGTCGATCGCCCCGTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACATTGACGGTCAATC  >  NC_002947/2120315‑2120608                                                                                                                                                     |                                                                                                                                                  cacccgccgtgagggtcagtgtgtcgtcgaagtagcagacccggatcagtggattgaccgtcaatgtcgcgggcgccacagaggccatgctgatggcctgcttgctggtacccgggtcggtggcgatgatccggacccgcacgggtttc                                                                                                                                                   >  5:148129‑M1/149‑149 (MQ=255)  cggcacggcCGGCATGCGCATCGTCGATCGCCCCGTGACGCTGGCACCTGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGAc                                                                                                                                                   <  5:136102/148‑1 (MQ=255)   ggcacggcCGGCATGCGCATCGTCGATCGCCCCGTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGAccc                                                                                                                                                 >  6:273468/1‑149 (MQ=255)    ccgccgtgagggtcagtgtgtcgtcgaagtagcagacccggatcagtggattgaccgtcaatgtcgcgggcgccacagaggccatgctgatggcctgcttgctggtacccgggtcggtggcgatgatccggacccgcacgggtttcccc                                                                                                                                                <  6:58204‑M1/4‑1 (MQ=255)    ccgccgtgagggtcagtgtgtcgtcgaagtagcagacccggatcagtggattgaccgtcaatgtcgcgggcgccacagaggccatgctgatggcctgcttgctggtacccgggtcggtggcgatgatccggacccgcacgggtttcccc                                                                                                                                                <  5:311469‑M1/4‑1 (MQ=255)                        gtcgATCGCCCCGTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGc                                                                                                                            <  8:200556/149‑1 (MQ=255)                                    gTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCa                                                                                                                >  7:14004/1‑149 (MQ=255)                                    gTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCa                                                                                                                >  2:305605/1‑149 (MQ=255)                                    gTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCGTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCa                                                                                                                >  3:75112/1‑149 (MQ=255)                                              tcagtggattgaccgtcaatgtcgcgggcgccacagaggccatgctgatggcctgcttgctggtacccgggtcggtggcgatgatccggacccgcacgggtttCCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCg                                                                                                      >  4:127043‑M1/104‑149 (MQ=255)                                                 ccGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCggg                                                                                                    >  6:141500/1‑148 (MQ=255)                                                         cGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGTGCTGACAGGGGCCCGGGATGCTTTGCCAGGCACTGTCGTTGATCTGGGGCGCATCGACCCCGCCAGCGTTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGt                                                                                           <  4:301306/149‑1 (MQ=255)                                                           gCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGc                                                                                         >  4:213861/1‑149 (MQ=255)                                                           cgtcaatgtcgcgggcgccacagaggccatgctgatggcctgcttgctggtacccgggtcggtggcgatgatccggacccgcacgggtttCCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGa                                                                                                  <  3:13147‑M1/50‑1 (MQ=255)                                                           cgtcaatgtcgcgggcgccacagaggccatgctgatggcctgcttgctggtacccgggtcggtggcgatgatccggacccgcacgggtttCCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGa                                                                                                  >  4:13147‑M1/91‑140 (MQ=255)                                                             aTAAGTTCAGAGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGTTGATCTGGGGCTCATCGACCCCGCCAGAGGTGAATACAGCTCACCGCCTGCGCCCGCCATGGCGGGGAAACCAGTGctg                                                                                       >  7:135959/1‑147 (MQ=255)                                                              tACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCggg                                                                                      >  3:39202/1‑149 (MQ=255)                                                                 gTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTcc                                                                                   >  4:13225/1‑149 (MQ=255)                                                                 gTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTcc                                                                                   <  8:14004/149‑1 (MQ=255)                                                                     aGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGGCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGat                                                                               <  4:75112/149‑1 (MQ=255)                                                                        gTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGatcat                                                                            >  7:3855/1‑149 (MQ=255)                                                                           gAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGc                                                                         >  2:132023/1‑149 (MQ=255)                                                                            aaCCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGc                                                                         <  3:213861/148‑1 (MQ=255)                                                                             aCCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCa                                                                       >  2:46233/1‑149 (MQ=255)                                                                               cgccgcGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCAcc                                                                     >  2:314828/1‑149 (MQ=255)                                                                                gccgcGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCAcc                                                                     >  2:315053/1‑148 (MQ=255)                                                                                      tGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCgg                                                              >  7:16281/1‑149 (MQ=255)                                                                                        aaGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGTGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCTACCCggg                                                             <  1:39691/148‑1 (MQ=255)                                                                                        aaGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCggg                                                             >  2:39691/1‑148 (MQ=255)                                                                                         aGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTCGGGCGCATCGACACCGCCAGCGGTGAATACAGGGCACCGCCTGCGCACGCCAAGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTa                                                           >  2:220661/1‑149 (MQ=255)                                                                                                     gTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAgg                                               >  6:241493/1‑149 (MQ=255)                                                                                                     gTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAgg                                               >  7:117811/1‑149 (MQ=255)                                                                                                     gTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAg                                                <  4:39202/148‑1 (MQ=255)                                                                                                     gTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAg                                                <  3:13225/148‑1 (MQ=255)                                                                                                       cccTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTg                                                                                          >  4:254683/1‑104 (MQ=255)                                                                                                       cccTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTg                                                                                          <  3:254683/104‑1 (MQ=255)                                                                                                             aGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGc                                       <  1:46233/149‑1 (MQ=255)                                                                                                                     ccAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCctc                               <  1:315053/149‑1 (MQ=255)                                                                                                                      cAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCcgct                              >  6:128837/1‑149 (MQ=255)                                                                                                                         gCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCtgtg                           <  5:141500/149‑1 (MQ=255)                                                                                                                          cACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTgg                          <  5:273468/149‑1 (MQ=255)                                                                                                                          cACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCGCtgttg                          <  5:128837/149‑3 (MQ=255)                                                                                                                               tCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGTATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCTCCACCGACCAGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGccc                     <  1:220661/149‑1 (MQ=255)                                                                                                                                  gTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCa                                            <  7:165669/123‑1 (MQ=255)                                                                                                                                  gTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCa                                            >  8:165669/1‑123 (MQ=255)                                                                                                                                         ggggCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACATTGa           >  6:311469/1‑149 (MQ=255)                                                                                                                                          gggCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACa               <  8:16281/144‑1 (MQ=255)                                                                                                                                           ggCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACATTGACg         <  1:132023/149‑1 (MQ=255)                                                                                                                                             cgcATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACATTGACGGt       <  8:3855/149‑1 (MQ=255)                                                                                                                                                   gACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACATTGACGGTCAATc  >  5:181502/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                  ACGGCACGGCCGGCATGCGCATCGTCGATCGCCCCGTGACGCTGGCACCCGGGCAGCGGCATACGTTCAGCGTTGAACCGCCGCGTGAAGGGCTGACATGGTCCCTGGAGGCTTTGCCAGGCACTGTCGGTGATCTGGGGCGCATCGACCCCGCCAGCGGTGAATACCGGGCACCGCCTGCGCACGCCATGGCGGGGAAACCCGTGCGGGTCCGGATCATCGCCACCGACCCGGGTACCAGCAAGCAGGCCATCAGCATGGCCTCTGTGGCGCCCGCGACATTGACGGTCAATC  >  NC_002947/2120315‑2120608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.