New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2964684 =	48 (0.970)	3 (0.060)	3/244	NT	6.4%	coding (186/942 nt)	fatD	ferric anguibactin transport system permease FatD
	?	NC_002947	2964750 =	42 (0.890)					coding (120/942 nt)	fatD	ferric anguibactin transport system permease FatD

ACACGGCCAGTGCGAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGCCAGTGAGGCCGCG  >  NC_002947/2964536‑2964831                                                                                                                                                     |                                                                                                                                                    acacGGCCAGTGCGAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATcaca                                                                                                                                                     >  6:143031/1‑149 (MQ=255)   acGGCCAGTGCGAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACAcc                                                                                                                                                   <  8:260214/149‑1 (MQ=255)    cGGCCAGTGCGAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCg                                                                                                                                                  >  5:279961/1‑149 (MQ=255)      gCCAGTGCGAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCa                                                                                                                                                >  1:222793/1‑149 (MQ=255)        accgagggtggaacacgactgatgcgtgttgcatgcctcatcctgttcctggtgttgtgcgcggcctcactggctgtcggcgttcgtgagctggcctggtctcagttgcttaccctgcaaggcgacgcctggctgaccctgACCGCATa                                                                                                                                              <  7:152072‑M1/8‑1 (MQ=255)              gAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCa                                                                                                                                        <  5:143031/149‑1 (MQ=255)                   gCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGccc                                                                                                                                    >  1:172445/1‑148 (MQ=255)                    cATGCGCAGCAGTACCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGa                                                                                                                                  >  2:311067/1‑149 (MQ=255)                        cgcAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGCGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGAcacc                                                                                                                              >  3:49494/1‑149 (MQ=255)                         gcagcaGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGAcaccc                                                                                                                             >  1:7792/1‑149 (MQ=255)                           agcagTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATa                                                                                                                                              >  6:149795/1‑130 (MQ=255)                           agcagTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATa                                                                                                                                              <  5:149795/130‑1 (MQ=255)                               gTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAg                                                                                                                                       >  2:21006/1‑133 (MQ=255)                               gTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAg                                                                                                                                       <  1:21006/133‑1 (MQ=255)                                  ccccGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGAcaccca                                                                                                                            <  6:300059/141‑1 (MQ=255)                                  ccccGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGAcaccca                                                                                                                            >  5:300059/1‑141 (MQ=255)                                  ccccGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTAt                                                                                                                     >  4:58407/1‑148 (MQ=255)                                  ccccGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATc                                                                                                                    <  8:93117/149‑1 (MQ=255)                                             ggCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAg                                                                                                         <  2:222793/149‑1 (MQ=255)                                                   aGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTgg                                                                                                   <  3:116011/149‑1 (MQ=255)                                                         tggtgttgtgcgcggcctcactggctgtcggcgttcgtgagctggcctggtctcagttgcttaccctgcaaggcgacgcctggctgaccctgACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAggcg                                                                                             <  6:54582‑M1/57‑1 (MQ=255)                                                           cGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAggcggc                                                                                           <  3:143704/149‑1 (MQ=255)                                                                gtgcgcggcctcactggctgtcggcgttcgtgagctggcctggtctcagttgcttaccctgcaaggcgacgcctggctgaccctgACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGc                                                                                       >  5:54582‑M1/86‑148 (MQ=255)                                                                gcagGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCtt                                                                                         <  8:103933/146‑1 (MQ=255)                                                                gcagGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCtt                                                                                         >  7:103933/1‑146 (MQ=255)                                                                 cagGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCgg                                                                                     >  3:48785/1‑149 (MQ=255)                                                                    gcggcctcactggctgtcggcgttcgtgagctggcctggtctcagttgcttaccctgcaaggcgacgcctggctgaccctgACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCggtca                                                                                  >  8:152072‑M1/82‑149 (MQ=255)                                                                      tGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCggtcagg                                                                                <  7:214297/149‑1 (MQ=255)                                                                         ccAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCggtcagggt                                                                              >  1:88081/1‑148 (MQ=255)                                                                         ccAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCggtcagggt                                                                              >  6:240750/1‑148 (MQ=255)                                                                         ccAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCggtcagggt                                                                              >  2:234/1‑148 (MQ=255)                                                                          cAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCggtcagggtca                                                                            <  4:48785/149‑1 (MQ=255)                                                                                         gAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATAACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGACtt                                                             >  1:290956/1‑149 (MQ=255)                                                                                                       tgCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAAc                                               <  5:240750/149‑1 (MQ=255)                                                                                                        gCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACt                                              >  5:287468/1‑149 (MQ=255)                                                                                                         ccGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACt                                              >  6:76850/1‑148 (MQ=255)                                                                                                          cGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTga                                            <  2:172445/149‑1 (MQ=255)                                                                                                               tCAACGAAACGGTTGAGCACGAACTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGACGACAGCCGTCGCAGGCGGCATGAGGACACGCTCAGCCAGCCGTCGCCTTCCAGGGTAAGc                                                  >  3:131909/1‑138 (MQ=255)                                                                                                                cAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCa                                       <  3:7493/148‑1 (MQ=255)                                                                                                                 aaCGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAg                                      <  1:311067/148‑1 (MQ=255)                                                                                                                 aaCGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGCCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAgg                                     >  8:136576/1‑149 (MQ=255)                                                                                                                   cGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGt                                                                                                                       >  5:215763/1‑65 (MQ=255)                                                                                                                   cGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGt                                                                                                                       <  6:215763/65‑1 (MQ=255)                                                                                                                      aaCGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGc                                >  1:185268/1‑149 (MQ=255)                                                                                                                         ggTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCa                             <  4:49494/149‑1 (MQ=255)                                                                                                                              cgcACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAAc                        <  2:7792/149‑1 (MQ=255)                                                                                                                                 aCGTTCTGCTGCAGGATCACACCGCATACCGCCAGCGCGAGACCGACCAGTATCTAGGCGGCCAGCCGTGGCTGGCGGCTTGCGGTGAGGGTCAGCCAGGCGTCGCCTTGGAGGGTAAGGAACTGAGACGAGGGCAGCTCTGGATCGcc                     <  2:290956/149‑1 (MQ=255)                                                                                                                                 aCGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCGTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGcc                     <  6:66499/149‑1 (MQ=255)                                                                                                                                   gATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGa                   >  3:2151/1‑149 (MQ=255)                                                                                                                                     tCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAg                                                                       >  7:214248/1‑95 (MQ=255)                                                                                                                                     tCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAg                                                                       <  8:214248/95‑1 (MQ=255)                                                                                                                                         ctgcAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAg                <  3:58407/146‑1 (MQ=255)                                                                                                                                            cAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGCCAGt           <  2:88081/148‑1 (MQ=255)                                                                                                                                             aGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGc               <  4:173069/143‑1 (MQ=255)                                                                                                                                             aGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGc               >  3:173069/1‑143 (MQ=255)                                                                                                                                                    cacCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGCCAGTGAGGCcgcg  <  3:107024/149‑1 (MQ=255)                                                                                                                                                     ACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGCCAGTGAGGCcgcg  <  8:141346‑M1/148‑1 (MQ=255)                                                                                                                                                     ACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCAGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGCCAGTGAGGCcgcg  <  2:16041‑M1/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ACACGGCCAGTGCGAACAGCATGCGCAGCAGTGCCCCGGCCGCGGGCGCCAGGCCCAGCGACAGCAGGATGCCCAGGCGCGCGGCATCGAGCCCGCCGGTGGTGCCGGGTTCAACGAAACGGTTGCGCACGATCTGCTGCAGGATCACACCGCATACCGCCAGCCCGACACCCACCAGTATCAAGGCGGCCAGCCGTGGCAGGCGGCTTGCGGTCAGGGTCAGCCAGGCGTCGCCTTGCAGGGTAAGCAACTGAGACCAGGCCAGCTCACGAACGCCGACAGCCAGTGAGGCCGCG  >  NC_002947/2964536‑2964831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.