New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3577425 =	26 (0.530)	3 (0.070)	3/228	NT	10.9%	intergenic (+19/‑161)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein
	?	NC_002947	3577480 =	26 (0.590)					intergenic (+74/‑106)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein

ATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCG  >  NC_002947/3577278‑3577549                                                                                                                                                    |                                                                                                                             atcGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTgg                                                                                                                             >  5:239151/1‑149 (MQ=255)  tcGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGc                                                                                                                            >  5:1417/1‑149 (MQ=255)    gAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCct                                                                                                                          >  8:24447/1‑149 (MQ=255)     gggggaggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCctc                                                                                                                         >  8:144717‑M1/144‑149 (MQ=255)          aggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTcgc                                                                                                                    >  6:76513‑M1/139‑149 (MQ=255)                 gCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCgggtaac                                                                                                             >  7:47621/1‑145 (MQ=255)                  cGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGt                                                                                                            <  2:269559/149‑1 (MQ=255)                  cGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGt                                                                                                            <  6:1417/149‑1 (MQ=255)                       tCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGAAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCctt                                                                                                       >  8:185231/1‑149 (MQ=255)                                   aTGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCg                                                                                           <  1:123699/149‑1 (MQ=255)                                    tGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCgg                                                                                          <  4:207110/149‑1 (MQ=255)                                     ggCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCgg                                                                                          <  6:239151/148‑1 (MQ=255)                                         gTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTAc                                                                                     <  7:24447/149‑1 (MQ=255)                                                gatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGaa                                                                              >  8:9299‑M1/101‑149 (MQ=255)                                                  aGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGaa                                                                              >  1:124130/1‑147 (MQ=255)                                                                    tggCGTGTGGTGACCTTGTGGTGCTTGCGCTGGTGGTGTATATGTTGCGCCACGCATTGTTATCGGGGTTCTTCGCTCCTGGCCTTTTCGGGGGGGTGTCCTTTCTTGTGGGTGCGGGTTCCCGGCTAAGTGGCCGCCACAGGTTTGc                                                           <  4:114846/148‑1 (MQ=255)                                                                    tggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCa                                                          <  6:66239/149‑1 (MQ=255)                                                                      gCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGc                                                           >  3:114846/1‑146 (MQ=255)                                                                      gCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTGCGCGGGCGAGTCCCTTCTtg                                                                                                   >  8:140984/1‑106 (MQ=255)                                                                       gtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTTTGGGAGCGGGTTACCCGCGAagag                                                                           <  1:216332‑M1/52‑1 (MQ=255)                                                                       gtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAagag                                                                           >  2:216332‑M1/78‑129 (MQ=255)                                                                                aCCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGttt                                                             <  4:70193/134‑1 (MQ=255)                                                                                aCCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGttt                                                             >  3:70193/1‑134 (MQ=255)                                                                                  ccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAg                                                                                                             <  6:68026/84‑1 (MQ=255)                                                                                  ccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAg                                                                                                             >  5:68026/1‑84 (MQ=255)                                                                                                 cAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCAt                             >  6:29695/1‑149 (MQ=255)                                                                                                     tGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATtctctc                                                   >  3:281203/1‑123 (MQ=255)                                                                                                          gagaTGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGct                    >  6:99089/1‑149 (MQ=255)                                                                                                            gaTGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACtttt                                   >  3:21404/1‑132 (MQ=255)                                                                                                                  gcgcCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCtt            >  1:155861/1‑149 (MQ=255)                                                                                                                         gccaTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAgg     <  5:29695/149‑1 (MQ=255)                                                                                                                            aTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCcg  >  2:275322/1‑149 (MQ=255)                                                                                                                                gATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTcc                                                  <  5:112530/97‑1 (MQ=255)                                                                                                                                gATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTcc                                                  >  6:112530/1‑97 (MQ=255)                                                                                                                                                    |                                                                                                                             ATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCG  >  NC_002947/3577278‑3577549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.