New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4330858 =	42 (0.850)	5 (0.110)	5/242	NT	10.0%	coding (304/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
	?	NC_002947	4330923 =	50 (1.070)					coding (369/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein

AAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAGCGCCAGCGCG  >  NC_002947/4330711‑4331005                                                                                                                                                    |                                                                                                                                                    gccgacatcggttcgtccagcaccagcaactgcggctcggggatcaggccctgggccagcagcacgcgctggcgctcaccgccggacagtgcccccatgcgccgcgtgcgcttgtcgagcatgccaacctgaaccaaggctgcatcaAt                                                                                                                                                    >  2:269520‑M1/148‑149 (MQ=255) aaGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCAt                                                                                                                                                    >  8:201928/1‑149 (MQ=255)  agagCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATg                                                                                                                                                   <  5:112593/149‑1 (MQ=255)                aaGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGc                                                                                                                                       >  8:72855/1‑147 (MQ=255)                  gACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAgc                                                                                                                                   >  7:246859/1‑149 (MQ=255)                     ccTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATg                                                                                                                                                   >  3:186630/1‑130 (MQ=255)                     ccTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATg                                                                                                                                                   <  4:186630/130‑1 (MQ=255)                          tCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCg                                                                                                                           >  7:59723/1‑149 (MQ=255)                            gggCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCg                                                                                                                           <  8:59723/147‑1 (MQ=255)                              ctgcggctcggggatcaggccctgggccagcagcacgcgctggcgctcaccgccggacagtgcccccatgcgccgcgtgcgcttgtcgagcatgccaacctgaaccaaggctgcatcaATg                                                                                                                                                   >  5:249666‑M1/119‑121 (MQ=255)                              ctgcggctcggggatcaggccctgggccagcagcacgcgctggcgctcaccgccggacagtgcccccatgcgccgcgtgcgcttgtcgagcatgccaacctgaaccaaggctgcatcaATg                                                                                                                                                   <  6:249666‑M1/3‑1 (MQ=255)                                      cacaCCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGc                                                                                                               <  1:276501/149‑1 (MQ=255)                                        cacCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCt                                                                                                             >  7:128189/1‑149 (MQ=255)                                            aGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTcg                                                                                                         >  2:38555/1‑149 (MQ=255)                                                ccAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCgcggc                                                                                                     <  5:194571/149‑1 (MQ=255)                                                    cTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGt                                                                                                 <  7:79892/149‑1 (MQ=255)                                                       aCCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTg                                                                                                >  8:26359/1‑147 (MQ=255)                                                              aTTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGc                                                                                        >  6:265969/1‑148 (MQ=255)                                                              aTTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGc                                                                                        >  4:231629/1‑148 (MQ=255)                                                                  gCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCTGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCAtt                                                                                    >  5:14458/1‑148 (MQ=255)                                                                  gCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCAtt                                                                                    >  4:81077/1‑148 (MQ=255)                                                                    cTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGAt                                                                                 <  3:81077/149‑1 (MQ=255)                                                                    cTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGAt                                                                                 >  1:303090/1‑149 (MQ=255)                                                                          gctcaccgccggacagtgcccccatgcgccgcgtgcgcttgtcgagcatgccaacctgaaccaaggctgcatcaATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCAtt                                                                                    >  4:136476‑M1/75‑140 (MQ=255)                                                                          gctcaccgccggacagtgcccccatgcgccgcgtgcgcttgtcgagcatgccaacctgaaccaaggctgcatcaATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCAtt                                                                                    <  3:136476‑M1/66‑1 (MQ=255)                                                                          aGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGcc                                                                           >  6:319605/1‑149 (MQ=255)                                                                          aGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGc                                                                            <  2:303090/148‑1 (MQ=255)                                                                            cgcgAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCtt                                                                         <  5:265969/149‑1 (MQ=255)                                                                            cgcgAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCtt                                                                         >  8:265039/1‑149 (MQ=255)                                                                             gcgAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGATGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTg                                                                        <  2:86844/149‑1 (MQ=255)                                                                                aaGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGtt                                                                     <  1:122397/149‑1 (MQ=255)                                                                                   tGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAg                                                                  <  4:77030/149‑1 (MQ=255)                                                                                   tGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAg                                                                  <  8:128189/149‑1 (MQ=255)                                                                                     aTTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAgg                                                                 <  7:201928/148‑1 (MQ=255)                                                                                     aTTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGt                                                                <  1:14733/149‑1 (MQ=255)                                                                                        ggCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTg                                                              <  8:980/148‑1 (MQ=255)                                                                                        agtgcccccatgcgccgcgtgcgcttgtcgagcatgccaacctgaaccaaggctgcatcaATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTgg                                                             >  1:37740‑M1/61‑149 (MQ=255)                                                                                         gCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTgg                                                             >  5:292377/1‑148 (MQ=255)                                                                                                    cAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACaa                                                 <  2:302911/149‑1 (MQ=255)                                                                                                         aCTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTACCACGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCa                                            >  1:57965/1‑149 (MQ=255)                                                                                                           tGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCAcg                                          >  7:95365/1‑149 (MQ=255)                                                                                                             gAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCAcg                                          <  5:319605/147‑1 (MQ=255)                                                                                                              gcttgtcgagcatgccaacctgaaccaaggctgcatcaATGGCCGGCTT‑‑‑CACGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTg                                                                                                >  4:49310‑M1/39‑89 (MQ=255)                                                                                                              gcttgtcgagcatgccaacctgaaccaaggctgcatcaATGGCCGGCTT‑‑‑CACGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTg                                                                                                <  3:49310‑M1/51‑1 (MQ=255)                                                                                                                   gACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCAt                                  >  6:41829/1‑149 (MQ=255)                                                                                                                   gACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCAt                                  >  5:258776/1‑149 (MQ=255)                                                                                                                             tGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTg                        >  3:92373/1‑149 (MQ=255)                                                                                                                                ccATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTcc                     >  8:75626/1‑149 (MQ=255)                                                                                                                                  aTGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCcgg                   >  6:255363/1‑149 (MQ=255)                                                                                                                                  aTGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCcgg                   >  2:63036/1‑149 (MQ=255)                                                                                                                                     aCCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCcggcg                 <  6:258776/148‑1 (MQ=255)                                                                                                                                         tGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTcc                     <  5:133049/140‑1 (MQ=255)                                                                                                                                         tGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTcc                     >  6:133049/1‑140 (MQ=255)                                                                                                                                              gATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAgcgc         >  1:15908/1‑147 (MQ=255)                                                                                                                                                   cATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAgc           <  8:259889/140‑1 (MQ=255)                                                                                                                                                   cATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAgc           >  7:259889/1‑140 (MQ=255)                                                                                                                                                   cATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAGCGCCAgcgc   <  8:246859/148‑1 (MQ=255)                                                                                                                                                    ATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAGCGCCAGcgcg  >  7:26359‑M1/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                    AAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCCCGGCCTTCCTCGGCCTGTCGCGGCGCGTGAAGCCGGCCATTGATGCAGCCTTGGTTCAGGTTGGCATGCTCGACAAGCGCACGCGGCGCATGGGGGCACTGTCCGGCGGTGAGCGCCAGCGCG  >  NC_002947/4330711‑4331005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.