New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4348666 =	44 (0.890)	8 (0.170)	6/244	NT	16.0%	intergenic (‑31/+443)	PP_3820/galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
	?	NC_002947	4393012 =	NA (NA)					coding (3/1422 nt)	PP_3868	group II intron‑encoding maturase

CTTTGCACTGTCAGGCATCACCCTCGGCTTCTGGCCGGGATTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTT  >  NC_002947/4348519‑4348812                                                                                                                                                    |                                                                                                                                                   ggaaggtcgcgcgaattaccctgggagatctgtacgtttgccattgtgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgcc                                                                                                                                                   <  5:49181‑M1/2‑1 (MQ=255) aggaaggtcgcgcgaattaccctggagatctgtacgtttgccattgtgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgcc                                                                                                                                                   <  4:147875‑M1/2‑1 (MQ=255)  gaaggtcgcgcgaattaccctgggagatctgtacgtttgccattgtgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgccg                                                                                                                                                  <  1:209572‑M1/3‑1 (MQ=255)   aaggtcgcgcgatttaccctgggagatctgtacttttgcctttttgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgccgc                                                                                                                                                 >  2:151714‑M1/146‑149 (MQ=255)     ggtcgcgcgaattaccctgggagatctgtacgtttgccattgtgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCa                                                                                                                                               >  4:310399‑M1/144‑149 (MQ=255)                      tgggagatctgtacgtttgccattgtgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgccgc                                                                                                                                                 >  4:228124‑M1/127‑130 (MQ=255)                      tgggagatctgtacgtttgccattgtgctaccgcgcgtcgaaaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgccgc                                                                                                                                                 <  3:228124‑M1/4‑1 (MQ=255)                                                               aaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgccgcc                                                                                                                                                >  1:251418‑M1/86‑90 (MQ=255)                                                               aaggcgacgggatgagcgtgcagaagtcagccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgccgcc                                                                                                                                                <  2:251418‑M1/5‑1 (MQ=255)                                                                      tttCTGCATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAg                                                                              <  5:25786/149‑1 (MQ=11)                                                                         cTGCATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTg                                                                            <  1:207964/148‑1 (MQ=17)                                                                            cATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCaa                                                                        <  4:1980/149‑1 (MQ=17)                                                                              ttACGGTTACCCACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGc                                                                      <  8:287633/149‑1 (MQ=18)                                                                                 cGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTa                                                                   >  4:112407/1‑149 (MQ=21)                                                                                      aCCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTa                                                                   >  1:144822/1‑144 (MQ=21)                                                                                         aaCGAGACGGCGACGCCTACTGGCGGCGTAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAtctc                                                           >  1:12383/1‑149 (MQ=21)                                                                                         aaCGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTg                                                                            <  1:298169/132‑1 (MQ=17)                                                                                         aaCGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTg                                                                            >  2:298169/1‑132 (MQ=17)                                                                                           cGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCTCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACTCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTCGAAAGCGTTGAGAtctcgc                                                         <  6:75018/149‑3 (MQ=11)                                                                                             ccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCa                                                                                                                                               >  7:38853‑M1/56‑61 (MQ=255)                                                                                             ccgaagccgtagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCa                                                                                                                                               <  8:38853‑M1/6‑1 (MQ=255)                                                                                                    gACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAAtt                                                >  7:129210/1‑149 (MQ=34)                                                                                                    gACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGAACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGAAAGCGTAAAGATCTCCAAGGGTAAt                                                 >  6:5948/1‑148 (MQ=255)                                                                                                    cgtagtaagtggcggttaaccgcgccaccaagggcagaacaggttatgCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACACTCATCCCGTAGCCTTTCGACGCGCGGTAGCACATTGGACAGCGTACAGATctcccagactaat                                                 <  8:250454‑M1/100‑7 (MQ=255)                                                                                                     aCGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTCACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTc                                               <  8:222353/149‑1 (MQ=21)                                                                                                      tagtaagtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTcg                                              <  8:292047‑M1/103‑1 (MQ=255)                                                                                                       gCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTcgc                                             <  7:234655/149‑1 (MQ=34)                                                                                                         cTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTcgcgc                                           <  6:309812/149‑1 (MQ=21)                                                                                                         cTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTcgcgc                                           <  3:112407/149‑1 (MQ=21)                                                                                                         cTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTcgcgc                                           <  5:171497/149‑1 (MQ=34)                                                                                                         cTACTGGCGGCATAACATGTTCGGCCCTTGGTGGCGCGGTTAACCGCCAATTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGCTAGCACAGTGGCAAGCGTACAGATCACCAAGGGAAATTcgcgc                                           >  2:228272/1‑149 (MQ=11)                                                                                                           agtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTcgcgcg                                          >  7:292047‑M1/42‑148 (MQ=255)                                                                                                            gtggcggttaaccgcgccaccaagggccgaacaggttatgCCTCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTAc                                                                  >  3:58588‑M1/41‑123 (MQ=255)                                                                                                            gtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAATGGCAAACGTACAGATCTCCCAGGGTAATTCGCGCGAc                                        <  7:137358‑M1/109‑1 (MQ=255)                                                                                                            gtggcggttaaccgcgccaccaagggccgaacaggttatgCCGCCACTTACTACGGCTTAGGCTGACTTCTGCACGCTCGTCCCGTCGCATTTAGACGCGCGGTAGCACAGTGTCAAGCGTAc                                                                  <  4:58588‑M1/83‑1 (MQ=255)                                                                                                             tGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGAcc                                       >  6:70882/1‑149 (MQ=34)                                                                                                               gcggcATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCtt                                     >  6:238202/1‑149 (MQ=21)                                                                                                                cggcATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCTAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTc                                    <  4:65385/149‑1 (MQ=21)                                                                                                                cggcAAAACCTGGTCGGCCCGTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTc                                    <  6:264633/149‑1 (MQ=255)                                                                                                                   ttaaccgcgccaccaagggccgaacaggttatgCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAATGGCAAACGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTg                                 <  5:223501‑M1/116‑1 (MQ=255)                                                                                                                    aTAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGc                                >  1:8701/1‑149 (MQ=21)                                                                                                                    aTAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGc                                <  8:129210/149‑1 (MQ=34)                                                                                                                     tAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCt                               >  8:167723/1‑149 (MQ=21)                                                                                                                      aaCCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCt                               >  1:13265/1‑148 (MQ=21)                                                                                                                      aaCCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACATTCCTGCt                               >  5:223620/1‑148 (MQ=21)                                                                                                                        ccTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTAt                            >  8:268121/1‑149 (MQ=21)                                                                                                                        ccTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTAt                            >  1:232241/1‑149 (MQ=21)                                                                                                                        ccTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTAt                            >  7:108168/1‑149 (MQ=34)                                                                                                                         cTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATg                           >  6:139052/1‑149 (MQ=21)                                                                                                                         cTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGc                                >  7:150079/1‑144 (MQ=34)                                                                                                                         cTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGc                                <  8:150079/144‑1 (MQ=34)                                                                                                                          ctccacctagggccgaacaggttatgCCGCCACTTACTACGGCTTCGGCTGACTTCTTCACACTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGc                          >  7:250454‑M1/27‑149 (MQ=255)                                                                                                                            ttCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGc                          <  7:268121/147‑1 (MQ=21)                                                                                                                            ttCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCt                        >  5:192191/1‑149 (MQ=34)                                                                                                                             tCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCt                        <  7:129987/148‑1 (MQ=21)                                                                                                                              cGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGt                      >  8:281235/1‑149 (MQ=21)                                                                                                                               gtcccTTGTTGGCGCGGTTAACCGCCACTTACTAGGGGTTAGGATGACTTCTTCACTATCGTCCCGTCGCCTTTAGACGCGCGGTAGCAGAGTGGCAAGCGTACAGATCTCCGATGGTAATTCGCGCGACATTCCTTGTTATTCCTGt                      <  4:297908/146‑1 (MQ=11)                                                                                                                                   cTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGAt                 <  2:144822/149‑1 (MQ=21)                                                                                                                                   cTTGGTGGCGCGGTTAAACGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCAAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGa                  >  4:202655/1‑148 (MQ=21)                                                                                                                                      ggtggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCt               <  8:108168/148‑1 (MQ=34)                                                                                                                                       gtgtCGCGGTTAACAGCCACTGACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTAc             <  6:223620/149‑1 (MQ=255)                                                                                                                                       gtggCGCGGGTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTAc             <  4:69168/149‑1 (MQ=21)                                                                                                                                             cgGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTcaca       <  5:5948/149‑1 (MQ=34)                                                                                                                                                  aaCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGtt  >  6:250670/1‑149 (MQ=21)                                                                                                                                                   aCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGtt  <  7:167723/148‑1 (MQ=21)                                                                                                                                                   aCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGtt  <  5:238202/148‑1 (MQ=21)                                                                                                                                                    |                                                                                                                                                   CTTTGCACTGTCAGGCATCACCCTCGGCTTCTGGCCGGGATTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCCCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTT  >  NC_002947/4348519‑4348812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.