New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 199771	61 (1.240)	4 (0.080)	3/248	NT	5.9%	coding (5277/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 199796	68 (1.420)					coding (5302/26049 nt)	PP_0168	putative surface adhesion protein

GGTGGCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAGACCCCGG  >  NC_002947/199651‑199943                                                                                                                                                  |                                                                                                                                                       ggtggCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcag                                                                                                                                                     <  4:282142‑M2/149‑4 (MQ=255)  gtggCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagc                                                                                                                                                    <  2:237330‑M2/149‑5 (MQ=255)  cctatctaGCTGACTGCCACCCCTTCTTTGACCGAAGGCGGTGATATCACCTACACCATCAACCTGACCAACAAATACGGTCTTCCGATCAATAACCAATCGGATCTGTACTTCAAGCTGACCGAAGGCACAACTGTCGTCGTGGCAg                                                                                                                                                     <  4:157647/141‑1 (MQ=11)          gCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGca                                                                                                                                            <  1:49793/149‑1 (MQ=34)          gCTGACTGCCACCCCTTCGGTGAACGAAGGCGGTTAGATCACCTACCCCATCCACCTGACCAACAAAGACGGTCTGCAGAGCAATAACCACTCGGAGCTGTACTTCAAGATGACCGAAGTCCCCACTGTCGTCGTGGAAg                                                                                                                                                     >  3:157647/1‑140 (MQ=11)                  ccACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCaa                                                                                                                                                 >  4:66219/1‑136 (MQ=34)                  ccACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCaa                                                                                                                                                 <  3:66219/136‑1 (MQ=34)                    aCCCCTTCTGTGAACGAAGGCGGTGAGATCACCTACACCATCACCCTGACCCACACAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTc                                                                                                                                 <  3:174630/149‑1 (MQ=255)                         ttCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTCGCACCCAACAGCACCA‑CGGGATCGGCGa                                                                                                                            >  8:280505/1‑149 (MQ=255)                           cGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGa                                                                                                                            <  7:280505/147‑1 (MQ=40)                                  cGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCg                                                                                                                   >  2:302885/1‑149 (MQ=37)                                       gCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCAc                                                                                                                >  6:140500/1‑147 (MQ=37)                                       gCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCa                                                                                                              <  3:282142/149‑1 (MQ=37)                                         ggTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGa                                                                                                            >  5:91957/1‑149 (MQ=37)                                               aTCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGt                                                                                                      >  5:197277/1‑149 (MQ=37)                                                tCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTc                                                                                                     >  8:182103/1‑149 (MQ=37)                                                  aCCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCt                                                                                                    <  1:302885/148‑1 (MQ=37)                                                       cacCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGt                                                                                                <  7:272649/147‑1 (MQ=37)                                                         ccATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGc                                                                                            <  7:182103/149‑1 (MQ=37)                                                          cATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCa                                                                                           >  6:50373/1‑149 (MQ=37)                                                           aTCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGc                                                                                                                                   <  2:180269/108‑1 (MQ=35)                                                           aTCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGc                                                                                                                                   >  1:180269/1‑108 (MQ=35)                                                               cccTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAAc                                                                                    >  3:231206/1‑149 (MQ=40)                                                                ccTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCATCGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAAc                                                                                    <  1:237330/149‑1 (MQ=255)                                                                ccTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAAcc                                                                                                                    >  6:242760/1‑118 (MQ=39)                                                                ccTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAAcc                                                                                                                    <  5:242760/118‑1 (MQ=39)                                                                ccTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAAcg                                                                                   >  8:46195/1‑149 (MQ=40)                                                                   gACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGc                                                                                                                        >  6:51611/1‑111 (MQ=39)                                                                   gACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGc                                                                                                                        <  5:51611/111‑1 (MQ=39)                                                                       aacaaAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGt                                                                            <  4:285667/149‑1 (MQ=255)                                                                           aaGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGAt                                                                         >  8:278462/1‑148 (MQ=255)                                                                            aGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATc                                                                        >  1:22924/1‑148 (MQ=255)                                                                              aCGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCa                                                                                                              <  7:153762/110‑1 (MQ=38)                                                                              aCGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCa                                                                                                              >  8:153762/1‑110 (MQ=38)                                                                               cGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATg                                                                    <  7:60855/149‑1 (MQ=255)                                                                                 gTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGcc                                                                  <  5:50373/149‑1 (MQ=255)                                                                                       cGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGAc                                                            <  7:46195/149‑1 (MQ=255)                                                                                        gATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGAcg                                                           >  6:55495/1‑149 (MQ=255)                                                                                            aaTAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGt                                                       >  6:180321/1‑149 (MQ=255)                                                                                            aaTAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGt                                                       <  5:140500/149‑1 (MQ=255)                                                                                             aTAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGt                                                       >  4:172123/1‑148 (MQ=255)                                                                                              tAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCGATGTCGGCAC‑‑CACCGCGCCGGTGATCAATGCCATCGACGCGGt                                                       >  6:236833/1‑147 (MQ=255)                                                                                                 ccACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAgcg                                                  <  6:197277/149‑1 (MQ=255)                                                                                                  cACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAgcgg                                                 >  7:237756/1‑149 (MQ=255)                                                                                                    cTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAgcggcg                                               >  5:234868/1‑149 (MQ=255)                                                                                                             gTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGt                                      >  5:287704/1‑149 (MQ=255)                                                                                                             gTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGt                                      >  8:229183/1‑149 (MQ=255)                                                                                                                 ttCAAGCTGACCGATGGCACTACTGTCGTCGTGGcagcttgaagtacagctccgagtggttattgatcggcagaccgtctttgttggtcagcgtgatggtgtaggtgatctcgccgccttcggtcaccgaaggggtcgcggtcagcttc                                     <  7:105193‑M2/149‑116 (MQ=255)                                                                                                                 ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAgcggcg                                               <  1:128064/136‑1 (MQ=255)                                                                                                                 ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAgcggcg                                               >  2:128064/1‑136 (MQ=255)                                                                                                                   cAAGCTGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttattgatcggcagaccgtctttgttggtcagggtgatggtgtaggtgatctcaccgccttcggtcaccgaaggggtggcagtcagcttggc                                   <  5:136061‑M2/149‑118 (MQ=255)                                                                                                                   cAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGt                                >  4:133411/1‑149 (MQ=255)                                                                                                                   cAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGACAACAGCACCA‑CGGGCTAGGCGACTGCAACCGCACCAGACAACGt                                                                                                      <  1:212593/81‑1 (MQ=255)                                                                                                                   cAAGCTGACCGACGGCACCACTGTCGTCGTCGCAGCCAACAGCACAA‑AGGGCTCGGAGACTGCAACCGCAACAGACAACGt                                                                                                      >  2:212593/1‑81 (MQ=11)                                                                                                                    aaGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGt                                <  6:91957/148‑1 (MQ=255)                                                                                                                        tGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttattgatcggcagaccgtctttgttggtcagggtgatggtgtaggtgatctcac                                                                        >  5:71473‑M2/1‑27 (MQ=255)                                                                                                                        tGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttattgatcggcagaccgtctttgttggtcagggtgatggtgtaggtgatctcac                                                                        <  6:71473‑M2/107‑81 (MQ=255)                                                                                                                          aCCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGaaaa                         <  6:234868/149‑1 (MQ=255)                                                                                                                          aCCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGaaaa                         <  8:237756/149‑1 (MQ=255)                                                                                                                           ccGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaac                        <  7:229183/149‑1 (MQ=255)                                                                                                                           ccGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaac                        <  4:231206/149‑1 (MQ=255)                                                                                                                             gACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGt                                >  3:91845/1‑139 (MQ=255)                                                                                                                             gACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGt                                <  4:91845/139‑1 (MQ=255)                                                                                                                              aCGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaacctg                     <  6:287704/149‑1 (MQ=255)                                                                                                                              aCGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaacct                      >  6:138061/1‑148 (MQ=255)                                                                                                                                ggCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAg                                                    >  1:44072/1‑116 (MQ=255)                                                                                                                                ggCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAg                                                    <  2:44072/116‑1 (MQ=255)                                                                                                                                 gCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaacctgaac                  <  7:278462/149‑1 (MQ=255)                                                                                                                                 gCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaacctgaac                  <  5:55495/149‑1 (MQ=255)                                                                                                                                   accacTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaacctgaacct                <  3:172123/149‑1 (MQ=255)                                                                                                                                     cacTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAaacctgaacctg               >  7:75506/1‑148 (MQ=255)                                                                                                                                     cacTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTgg              <  5:180321/149‑1 (MQ=255)                                                                                                                                      acTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGTCAC‑‑CAACGCGCCGGTGATAAATGCCATCTACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGa             <  2:128649/149‑1 (MQ=255)                                                                                                                                       cTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGAc            <  2:22924/149‑1 (MQ=255)                                                                                                                                        tGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATc                                                               <  5:223941/97‑1 (MQ=255)                                                                                                                                        tGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATc                                                               >  6:223941/1‑97 (MQ=255)                                                                                                                                          tcgtcgTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAg         <  5:138061/149‑1 (MQ=255)                                                                                                                                           ggtcgtGTCAGCCAACAGCACCA‑CGGGCTCTGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAg         <  8:75506/147‑1 (MQ=255)                                                                                                                                                tGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACAGCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAGAccc     >  1:253390/1‑149 (MQ=255)                                                                                                                                                tGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCTGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAGACCCCg   <  5:236833/149‑1 (MQ=255)                                                                                                                                                  gCAGCCAACAGCACCA‑CAGGCTCGGCGACTCCAAACGCACCACACAACGGCTATGTCGGCAC‑‑CAACGAGCCGGGGATTAATGCCATCGACGCGGTCAGCGGAGCAGATGCGAGGAAGTATGAAAACCTGAACCTGGACAAGAcccccc  >  8:240242/1‑146 (MQ=14)                                                                                                                                                  |                                                                                                                                                       GGTGGCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCA‑CGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCAC‑‑CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAGACCCCGG  >  NC_002947/199651‑199943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.