| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 673769 = | 57 (1.150) | 4 (0.080) | 4/248 | NT | 7.4% | coding (340/471 nt) | PP_0575 | membrane protein |
| ? | NC_002947 | 673812 = | 45 (0.940) | coding (297/471 nt) | PP_0575 | membrane protein | |||||
AAACCTGATAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGCCTCGCTGGC > NC_002947/673666‑673958 | cctgccaggctacatgctcggccgcttcggcgccgacgacgtcaagctgatgggcgccctggccctggccaccagcccgcaatatgtgctcggcaccttcattGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAAt < 7:227888‑M1/46‑1 (MQ=255)aaaCCTGATAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAAt < 1:153830/149‑1 (MQ=255) ctgccaggctacatgctcggccgcttcggcgccgacgacgtcaagctgatgggcgccctggccctggccaccagcccgcaatatgtgctcggcaccttcattGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATg > 7:186993‑M1/103‑149 (MQ=255) aCCTGATAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATg > 6:47147/1‑148 (MQ=255) ccTGATAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGaa < 7:218002/149‑1 (MQ=255) ccaggctacatgctcggccgcttcggcgccgacgacgtcaagctgatgggcgccctggccctggccaccagcccgcaatatgtgctcggcaccttcattGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAg > 8:227888‑M1/100‑149 (MQ=255) tGATAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAgg > 3:88099/1‑149 (MQ=255) aTAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGt < 8:46363/148‑1 (MQ=255) aTAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGt < 7:250468/148‑1 (MQ=255) acagATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGcc < 8:299410/148‑1 (MQ=255) cacaTAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGa < 4:299995/149‑1 (MQ=255) aTAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGca > 1:18585/1‑149 (MQ=255) cGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGc < 8:69645/149‑1 (MQ=255) acccccTGCTGCTCGCCCATTTCTTCGGTCCGGGCCCGCACACGCTTCTTTACCGTGGGGGTGAGCAGAGTCCACAGGCGGCGGCGGGGCAGTAGCCAGCCCAGTACAGTGCCACCCGCGCCAATGAAGGTGCCGAGCACATATTGCgg < 6:135977/145‑1 (MQ=255) cTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCtgg < 4:235433/149‑1 (MQ=255) cTTGTAGCCCATTTCTTCGGTAAGGGCCTGCAAACGCTTGTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCTGGCttgtg < 3:57616/148‑1 (MQ=255) ttGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTggc < 4:77985/149‑1 (MQ=255) gCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCTAGCACATATTGCGGGCtg > 2:83743/1‑139 (MQ=255) gCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCtg < 1:83743/139‑1 (MQ=255) gCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTggccaggg > 8:127831/1‑149 (MQ=255) cccATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTTCCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTggcccgggc > 6:240081/1‑149 (MQ=255) cttcGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGgcg > 8:34201/1‑149 (MQ=255) tCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATc < 4:88099/149‑1 (MQ=255) ggCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCgg < 6:80258/117‑1 (MQ=255) ggCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCgg > 5:80258/1‑117 (MQ=255) ggCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCt < 7:34201/149‑1 (MQ=255) cTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGgcgc > 3:286172/1‑137 (MQ=255) cTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGgcgc < 4:286172/137‑1 (MQ=255) cTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATc < 3:11308/142‑1 (MQ=255) cTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATc > 4:11308/1‑142 (MQ=255) cTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGa > 6:212411/1‑149 (MQ=255) gCTTCTTTACCTAGGGGTTGAGAAGAGTCCACAGGCGCCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGCGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGtcgtcg > 2:74110/1‑149 (MQ=255) ttGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTCCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCCTCGGCGCCGAAGCg > 5:61499/1‑149 (MQ=255) tGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCgg > 4:80897/1‑149 (MQ=255) ggggTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCg < 3:196517/147‑1 (MQ=255) gTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGAc > 1:30219/1‑126 (MQ=255) gTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGAc < 2:30219/126‑1 (MQ=255) gTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGa < 5:47147/149‑1 (MQ=255) cttcattggcgcgggtgtcactgtactggtctggctactgacccgccgccAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTgg > 8:227888‑M2/51‑149 (MQ=255) cacaGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTgg > 1:269202/1‑149 (MQ=255) cacaGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTgg > 7:57349/1‑149 (MQ=255) cattggcgcgggtgtcactgtactggtctggctactgacccgccgccAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAg > 7:186993‑M2/48‑149 (MQ=255) aGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGTAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCGAGGGCGCCCTTCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAg < 1:74110/149‑1 (MQ=255) ggcggcggcGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAgg < 5:212411/149‑1 (MQ=255) attggcgcgggtgtcactgtactggtctggctactgacccgccgccAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAgg < 7:227888‑M2/103‑1 (MQ=255) GCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGt < 4:298823‑M1/147‑1 (MQ=255) GCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGt > 3:298823‑M1/1‑147 (MQ=255) tCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATg < 8:57349/149‑1 (MQ=255) tCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCCAGCATGTAGCCTGGCAGGGTCAGCAGCAt > 6:240164/1‑148 (MQ=255) aGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGcg > 1:112548/1‑148 (MQ=255) cAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATAATGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAgcg > 3:291956/1‑149 (MQ=255) tACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGcc > 6:23558/1‑148 (MQ=255) gTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAAcc < 5:23558/149‑1 (MQ=255) tGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCg > 6:63215/1‑94 (MQ=255) tGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCg < 5:63215/94‑1 (MQ=255) acccgccgccAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGcc < 8:186993‑M2/139‑1 (MQ=255) acCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATg > 2:168631/1‑100 (MQ=255) acCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATg < 1:168631/100‑1 (MQ=255) acCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGCCt > 3:70867/1‑149 (MQ=255) ccGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGCCTCg > 5:137046/1‑149 (MQ=255) gccAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGCCTCGCTgg > 4:72925‑M2/4‑149 (MQ=255) ccAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGCCTCGCCGGc < 5:240081‑M2/147‑1 (MQ=255) | AAACCTGATAACACATAGGGGACGAACGCCTGCTTGTCGCCCATTTCTTCGGTCAGGGCCTGCAAACGCTTCTTTACCTTGGGGTTGAGCAGAGTCCACAGGCGGCGGCGGGTCAGTAGCCAGACCAGTACAGTGACACCCGCGCCAATGAAGGTGCCGAGCACATATTGCGGGCTGGTGGCCAGGGCCAGGGCGCCCATCAGCTTGACGTCGTCGGCGCCGAAGCGGCCGAGCATGTAGCCTGGCAGGGTCAGCAGCATGACGATGGCCAGCGCCCAACCGGCCTCGCTGGC > NC_002947/673666‑673958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |