New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 691803 | 58 (1.170) | 3 (0.060) | 3/244 | NT | 5.2% | coding (559/585 nt) | yigZ | ribosome‑binding factor |
? | NC_002947 | = 691844 | 54 (1.150) | coding (518/585 nt) | yigZ | ribosome‑binding factor |
GGGGCCTCGAAATCACTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGGCTGCGCTGCA > NC_002947/691698‑691988 | ggggCCTCGAAATCACTAGGCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGGTGCAATGGCGCCAGGTgg > 6:256264‑M2/1‑147 (MQ=255) ggggCCTCGAAATCACTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCCCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGt < 8:66209/147‑1 (MQ=255) ggCCTCGAAATCACTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTgggc > 5:185752‑M2/1‑145 (MQ=255) gAAATCACTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCa < 7:261970/147‑1 (MQ=255) aaaTCACTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCg < 7:216101/149‑1 (MQ=255) aCTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAggg > 3:95814/1‑148 (MQ=255) ccTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCa > 5:285045/1‑149 (MQ=255) cTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCAc > 1:162179/1‑149 (MQ=255) cTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCAc > 7:169176/1‑149 (MQ=255) tGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCAcc > 7:214320/1‑149 (MQ=255) cAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCa < 1:273814/148‑1 (MQ=255) cAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAg > 6:73439/1‑149 (MQ=255) aaGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAgg < 2:162179/149‑1 (MQ=255) cccAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCAt > 5:198934/1‑149 (MQ=255) cAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTg > 5:28017/1‑149 (MQ=255) cAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTg > 8:204896/1‑149 (MQ=255) cAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTg < 4:111310/149‑1 (MQ=255) tCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGaa > 3:181768/1‑149 (MQ=255) ccACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCAcc > 5:144131/1‑125 (MQ=255) ccACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCAcc < 6:144131/125‑1 (MQ=255) ccACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAAc > 3:144368/1‑149 (MQ=255) cacaGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACt > 1:39372/1‑149 (MQ=255) acaGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTg > 5:312339/1‑149 (MQ=255) caGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGt < 4:95814/149‑1 (MQ=255) aGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGtt < 6:28017/149‑1 (MQ=255) gCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAg < 3:260432/109‑1 (MQ=255) gCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAg > 4:260432/1‑109 (MQ=255) gggCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATc < 6:285045/149‑1 (MQ=255) ggCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATcc < 4:152080/149‑1 (MQ=255) acaGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAggg > 1:45131/1‑103 (MQ=255) acaGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAggg < 2:45131/103‑1 (MQ=255) acaGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGAc < 6:198934/149‑1 (MQ=255) acaGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGAc > 2:259224/1‑149 (MQ=255) aGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCa < 5:73439/149‑1 (MQ=255) gttgttGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAg < 8:169176/149‑1 (MQ=255) ttgtGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGcc < 4:144368/148‑1 (MQ=255) aaTGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTc > 2:184412/1‑149 (MQ=255) aTGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCg < 4:79087/149‑1 (MQ=255) gTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGTCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGc < 7:204896/149‑1 (MQ=255) gTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATCGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGc < 1:259224/149‑1 (MQ=255) tCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGaa > 8:37887/1‑104 (MQ=255) tCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGaa < 7:37887/104‑1 (MQ=255) aGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTgggcgtattttgctcgaagcacgctgaacattgcccacaacaactgtgggcccgcctgtggataagcttggggaactctcgtgcaggctagtga < 4:1638‑M2/149‑95 (MQ=255) cAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTgggcgtattttgctcgaagcacgctgaacattgcccacaacaactgtgggcccgcctgtggataagcttggggcactctcttgcaggctagtgatt < 8:572‑M2/149‑97 (MQ=255) aaaTACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAgc < 7:249340/149‑1 (MQ=255) gCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAgg > 4:310490/1‑110 (MQ=255) gCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAgg < 3:310490/110‑1 (MQ=255) tCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGaac > 4:277423/1‑148 (MQ=255) aGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGaaa < 4:181768/147‑1 (MQ=255) ggTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAgg > 1:67363/1‑47 (MQ=255) ggTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAgg < 2:67363/47‑1 (MQ=255) gTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTgggcgtattttgctcgaagcacgctgaacattgcccacaacaactgtgggcccgcctgtggataagcttggggcactctcttgcaggctagtgatttcgaggcccccagagctttga > 7:572‑M2/1‑32 (MQ=255) aGTAGCTGTTGAAATGGCGACAGCTGGGCGTCACCGATGGAAATCACCACGAACACACCATTGGCGGTGAACTGTTCATCCAGGACCATGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGATAGCTTAaactgcaactc > 6:301736/1‑146 (MQ=255) tGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGa > 3:101567/1‑148 (MQ=255) gTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGaaa > 3:122438/1‑149 (MQ=255) cAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGgc > 4:48463/1‑149 (MQ=255) cAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATAGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGgc > 1:289453/1‑149 (MQ=255) aaTGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGc < 3:68313/117‑1 (MQ=255) aaTGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGc > 4:68313/1‑117 (MQ=255) aaTGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGgct < 4:122438/149‑1 (MQ=255) aTGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGgctg < 6:312339/149‑1 (MQ=255) gcgcCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGgctgcgc > 2:168714/1‑149 (MQ=255) cAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGGCTGCGCTGCa < 5:107117/149‑1 (MQ=255) | GGGGCCTCGAAATCACTAGCCTGCAAGAGAGTGCCCCAAGCTTATCCACAGGCGGGCCCACAGTTGTTGTGGGCAATGTTCAGCGTGCTTCGAGCAAAATACGCCCGCGGCTCAGGTCCGCCAGTTGCTGTTGCAATGGCGCCAGGTGGGCGTCACCGAGGGCAATCACCAGGTCCACACCATTGGCGGTGAACTGTTCATCCAGGACCAGGCCGTCAACCTCGGCCAGACGCAGCTTCACCAGCGCCAGCTCGCTGAAACTGCAACTGCAGCTGAAATGGCTGCGCTGCA > NC_002947/691698‑691988 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |