| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 767988 = | 56 (1.130) | 4 (0.080) | 4/246 | NT | 7.2% | coding (66/1440 nt) | mmuP | S‑methyl‑L‑methionine transporter |
| ? | NC_002947 | 768018 = | 49 (1.030) | coding (96/1440 nt) | mmuP | S‑methyl‑L‑methionine transporter | |||||
AGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGCCTGGGCGAGCTGGCGGTACACATGCCGGAAG > NC_002947/767871‑768166 | aGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAg < 2:245506/149‑1 (MQ=255) cGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGa < 6:326862/149‑1 (MQ=255) aGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCCTCATGCTGGCGCTGGGCGGAGTGATa < 6:72025/149‑1 (MQ=255) atgacaaggtacaccatgattgcgccgagtatgtcagcgaggaccgcgcccaacgggccggcctgggtaacggtgtagcccgacgtgagaaacaggccggtgcctatcactCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAg > 8:160693‑M1/112‑149 (MQ=255) cTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGc > 7:78635/1‑149 (MQ=255) tACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATa > 8:211652/1‑139 (MQ=255) tACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATa < 7:211652/139‑1 (MQ=255) tACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGcc > 1:298091/1‑149 (MQ=255) aCGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCt > 2:157797/1‑149 (MQ=255) cGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTg < 3:196560/149‑1 (MQ=255) tCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGtt < 7:122080/149‑1 (MQ=255) cTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTtc > 1:149144/1‑149 (MQ=255) cTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTtc > 6:191038/1‑149 (MQ=255) cAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCgg > 7:288604/1‑149 (MQ=255) aCTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGc < 5:111260/149‑1 (MQ=255) tttCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGACTGTTTCTCACGTCGGGCt > 3:45214/1‑148 (MQ=255) aTGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACAcc > 8:114095/1‑149 (MQ=255) aCCCACAATGTCCGTTCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAAc < 8:288604/148‑1 (MQ=255) aCCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAAc < 7:124167/148‑1 (MQ=255) cccACAATGTCCGTGCTGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGttt < 8:246039/123‑1 (MQ=255) cccACAATGTCCGTGCCGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGttt > 7:246039/1‑123 (MQ=255) cccACAATGTCCGTGCAGACAACCACAACTAGAAATGCATCGGCGCATACCTACAAGCAGGATAAGCAAACCCGCCACATCGTCATGCTGGCGATGGGCGGAGTGATAGGCACCGGCATGTTTCTAACGTCGGGCTACACCGTAAAc > 4:248895/1‑147 (MQ=255) ccACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAACCCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCCCGTCGGGCTACACCGGTAACCAg > 7:101259/1‑149 (MQ=255) aacaATGTACGTGCAGACAACCACAACTAGAAATGACTCTGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTTGTCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACAGTTAACCAgg < 4:45214/148‑1 (MQ=255) acaATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAggc > 3:295682/1‑149 (MQ=255) gTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAg > 3:57467/1‑142 (MQ=255) gTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAg < 4:57467/142‑1 (MQ=255) tCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGccc < 2:298091/149‑1 (MQ=255) gCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTgg > 2:42977/1‑149 (MQ=255) cAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTgg < 7:114095/148‑1 (MQ=255) cAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGc‑gcg < 5:191038/149‑1 (MQ=255) ccACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGc < 8:170577/113‑1 (MQ=255) ccACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGc > 7:170577/1‑113 (MQ=255) cTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCt > 6:150271/1‑149 (MQ=255) tAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCt > 2:289680/1‑148 (MQ=255) gAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTa > 7:207761/1‑148 (MQ=255) cTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCg < 8:181738/149‑1 (MQ=255) ggCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGgc < 7:186577/148‑1 (MQ=255) tACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCa > 8:286018/1‑149 (MQ=255) aCCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCAACGGACTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCTGTCATCGCTTACATACTCGGCGCAATCAt > 7:295369/1‑149 (MQ=255) ccTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATg < 5:150271/149‑1 (MQ=255) cTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGCAGCGGTCATCGCTTACATACTCGGCGCAATCATg < 1:42977/149‑1 (MQ=255) cTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATgg > 6:26891/1‑149 (MQ=255) cAAGCAGGATATGCAAACCCGCCACATCGTCCTGCGGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGgt < 8:101259/147‑1 (MQ=255) gCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCAt < 6:83004/117‑1 (MQ=255) gCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTATCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCAt > 5:83004/1‑117 (MQ=255) atatGCAAACCCGCCACATGGTCATGCTGGCGCTGGGCGGAGTGTTAGGCACCGGCCTGTTTCTCACGTCGGTCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATTCTCGGCGCAATCATGGTGTACCTGGTc < 3:248895/149‑1 (MQ=255) ctatcactccgcccagcgccagcatgacgatgtggcggAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTACCCAGGCCGGCCCGTTGGGC‑GCGGTCCTCGCTGACATACTCGGCGCAATCATGGTGTACCTTGTCat > 8:160693‑M2/39‑149 (MQ=255) aaCCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGAtgt < 1:289680/149‑1 (MQ=255) aaCCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGAtgt < 7:286018/149‑1 (MQ=255) aaCCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGACGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGAtgt > 5:64214/1‑149 (MQ=255) CCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGcc < 1:56401‑M1/149‑1 (MQ=255) cgcccagcgccagcatgacgatgtggcggAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGgc > 5:159147‑M2/30‑117 (MQ=255) cgcccagcgccagcatgacgatgtggcggAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGgc < 6:159147‑M2/88‑1 (MQ=255) CACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCatg < 6:295803‑M1/138‑1 (MQ=255) CACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCatg > 5:295803‑M1/1‑138 (MQ=255) acaTCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGCCTGGGc < 2:56401/149‑1 (MQ=255) gcgccagcatgacgatgtggcggAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGCCTGGGCGa < 7:160693‑M2/126‑1 (MQ=255) gcgcTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGCCTGGGCGAGCTGGCGGTac < 2:149144/148‑1 (MQ=255) aGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGCCTGGGCGAGCTGGCGGTACACATGCCGGAAg > 2:252666/1‑149 (MQ=255) | AGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGC‑GCGGTCATCGCTTACATACTCGGCGCAATCATGGTGTACCTGGTCATGATGTGCCTGGGCGAGCTGGCGGTACACATGCCGGAAG > NC_002947/767871‑768166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |