New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	991669 =	42 (0.850)	4 (0.080)	4/248	NT	9.0%	coding (291/1464 nt)	der	GTPase Der
	?	NC_002947	991730 =	40 (0.840)					coding (352/1464 nt)	der	GTPase Der

CGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCGGTCACCTGCCGCGTGATGCC  >  NC_002947/991582‑991876                                                                                                                                                     |                                                                                                                                                    cGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCca                                                                                                                                                     <  4:33391/149‑1 (MQ=255)       aaTGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGa                                                                                                                                               <  8:1169/149‑1 (MQ=255)              gAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGacaa                                                                                                                                        <  7:177090/149‑1 (MQ=255)              gAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTCCCAACAAGATCGacaa                                                                                                                                        <  4:248622/149‑1 (MQ=255)                               cATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTg                                                                                                                       >  3:45901/1‑149 (MQ=255)                                 ttGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTCCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGcc                                                                                                                     >  7:81198/1‑149 (MQ=255)                                          ccGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACCACATCGACCCCGACGTTGCCCGCGCCGaa                                                                                                            >  6:42114/1‑149 (MQ=255)                                            gACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAAt                                                                                                           >  3:64121/1‑148 (MQ=255)                                              cTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATtct                                                                                                        <  3:105009/149‑1 (MQ=255)                                                aTGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCg                                                                                                      >  3:17832/1‑149 (MQ=255)                                                          ccTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATc                                                                                                                                    <  8:85780/109‑1 (MQ=255)                                                          ccTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATc                                                                                                                                    >  7:85780/1‑109 (MQ=255)                                                          ccTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGcc                                                                                                                     >  1:201373/1‑124 (MQ=255)                                                          ccTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGcc                                                                                                                     <  2:201373/124‑1 (MQ=255)                                                           cTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCAt                                                                                           <  5:156008/149‑1 (MQ=255)                                                           cTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCAt                                                                                           >  6:156008/1‑149 (MQ=255)                                                              gTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATgg                                                                                         <  3:38555/148‑1 (MQ=255)                                                                      ccGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCa                                                                                >  7:265997/1‑149 (MQ=255)                                                                            gtgTATGTCTGCGGCAGTCCAGTTGATGGCGGTGCAGCTGGGCTAGGGGATGATGGCGGCGATCTTGGTTGCCAACAAGATGGACAACTTCGACCCCGACGTTGCGGGCGGCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑Cggg                                                                         <  4:4155/147‑1 (MQ=255)                                                                            gggTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCgg                                                                         <  5:224964/149‑1 (MQ=255)                                                                            gggTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCgg                                                                         <  4:17832/149‑1 (MQ=255)                                                                              gTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGtg                                                                       <  4:64121/149‑1 (MQ=255)                                                                                  gACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGt                                                                                                                         >  6:87048/1‑96 (MQ=255)                                                                                  gACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGt                                                                                                                         <  5:87048/96‑1 (MQ=255)                                                                                      gCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTc                                                               >  4:75519/1‑149 (MQ=255)                                                                                         gcaaccaggatcgccgccttgttccgcttgcgcaggtgctcggcgatcatctggtctgccAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTcc                                                              >  7:142467‑M2/61‑147 (MQ=255)                                                                                              ccAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGcc                                                       >  2:84445/1‑149 (MQ=255)                                                                                                 gatgatCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGtt                                                                                                                        >  4:218179/1‑82 (MQ=255)                                                                                                 gatgatCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGtt                                                                                                                        <  3:218179/82‑1 (MQ=255)                                                                                                   tcgccgccttgttccgcttgcgcaggtgctcggcgatcatctggtctgccAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTgg                                                   >  4:7233‑M2/51‑148 (MQ=255)                                                                                                      tCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTAt                                                >  1:110917/1‑148 (MQ=255)                                                                                                        gCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCa                                              <  3:75519/148‑1 (MQ=255)                                                                                                          cGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGCCCCCGACGTTGCCCGCTCCGAATTCTCGCAAATGGGCATGGGTACCGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACg                                           >  4:215866/1‑149 (MQ=255)                                                                                                          cGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACg                                           >  6:180343/1‑149 (MQ=255)                                                                                                              cACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCtt                                       <  4:193566/149‑1 (MQ=255)                                                                                                                 cgcttgcgcaggtgctcggcgatcatctggtctgccAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGa                                     <  3:7233‑M2/112‑1 (MQ=255)                                                                                                                 cTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGAt                                    >  2:65606/1‑149 (MQ=255)                                                                                                                    cgcAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATgg                                  <  2:110917/148‑1 (MQ=255)                                                                                                                     gcAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGa                                 <  1:65606/149‑1 (MQ=255)                                                                                                                       aaGCGGAACAAGGCGGCGATCCTGGTTGCCTACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGc                              >  1:29645/1‑149 (MQ=255)                                                                                                                       aaGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGc                              >  5:197695/1‑149 (MQ=255)                                                                                                                         gCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCg                            <  2:29645/149‑1 (MQ=255)                                                                                                                                aaGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCgg                     <  5:180343/149‑1 (MQ=255)                                                                                                                                aaGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCgg                     <  8:265997/149‑1 (MQ=255)                                                                                                                                    cgatcatctggtctgccAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCGGTCAc                 <  8:142467‑M2/132‑1 (MQ=255)                                                                                                                                               gTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCGCGCGCCGATTTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCGGTCACCTGCCGCGt        <  8:81198/147‑1 (MQ=255)                                                                                                                                                   ccAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCGGTCACCTGCCGCGTGATGcc  <  1:84445‑M2/147‑1 (MQ=255)                                                                                                                                                    cAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGcc                                                                                                    <  5:222820‑M2/50‑1 (MQ=255)                                                                                                                                                    cAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGcc                                                                                                    >  6:222820‑M2/2‑51 (MQ=255)                                                                                                                                                    cAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCGGTCACCTGCCGCGTGATGcc  >  3:92527‑M2/2‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATT‑CCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCGGTCACCTGCCGCGTGATGCC  >  NC_002947/991582‑991876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.