New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1011706 =	51 (1.030)	3 (0.060)	3/248	NT	6.2%	coding (118/1584 nt)	prfC	peptide chain release factor 3
	?	NC_002947	1011757 =	42 (0.880)					coding (169/1584 nt)	prfC	peptide chain release factor 3

AGTCGCGAAGCGCCGCACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGA  >  NC_002947/1011609‑1011902                                                                                                                                                      |                                                                                                                                                  aGTCGCGAAGCGCCGCACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACt                                                                                                                                                   <  5:235816/149‑1 (MQ=255)     ggtgtcgagcaggttgatcatgtgctcgcggtacgggaactgcatcaccgaggtggtgatggagatgccgcgctgcttctccatttccatccaGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACtggat                                                                                                                                               >  7:149162‑M1/94‑149 (MQ=255)     gcgAAGCGCCGCACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACtgga                                                                                                                                                <  8:44312/148‑1 (MQ=255)     gcgAAGCGCCGCACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACtgga                                                                                                                                                <  4:304928/148‑1 (MQ=255)      gtctcgagcaggttgatcatgtgctcgcggtacgggaactgcatcaccgaggtcgtgatggagatgccgcgctgcttctccatttccatccaGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACtggatg                                                                                                                                              >  4:250018‑M1/93‑149 (MQ=255)       gAAGCGCCGCACTTTCGCATTCATTTCCCACCCCGTCGCCGGTAATTCCACCATCTCCGTGATGCTGCTGCTGATTGGCAAGGCCATTGCCGTCGCAGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACtggatgg                                                                                                                                             <  6:254958/149‑1 (MQ=255)            gccgcACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGACAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAAt                                                                                                                                         <  1:69961/149‑1 (MQ=255)             ccgcACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCTGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATgg                                                                                                                                       <  5:47204/149‑1 (MQ=255)             ccgcACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATgg                                                                                                                                       <  3:164958/149‑1 (MQ=255)                     tCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAagc                                                                                                                                 <  8:46188/147‑1 (MQ=255)                              tttCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCAtc                                                                                                                      >  6:199750/1‑149 (MQ=255)                                  ccACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTTA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCACCGCGGCATCTcc                                                                                                                   <  7:139042/148‑1 (MQ=255)                                   cACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAgcgc                                                                                                                            >  4:74976/1‑138 (MQ=255)                                   cACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAgcgc                                                                                                                            <  3:74976/138‑1 (MQ=255)                                   cACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCAt                                                                                                                 <  6:56277/149‑1 (MQ=255)                                     ccccGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATca                                                                                                               >  8:286882/1‑149 (MQ=255)                                              cGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCgg                                                                                                      <  2:135293/149‑1 (MQ=255)                                               ggTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGt                                                                                                     <  2:45914/149‑1 (MQ=255)                                                   aGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGCCTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGAGATg                                                                                                 <  5:228954/149‑1 (MQ=255)                                                    gACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGc                                                                                                <  2:234612/149‑1 (MQ=255)                                                     accaccATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCa                                                                                               <  7:286882/149‑1 (MQ=255)                                                          caTCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGgag                                                                                                                                     >  2:305781/1‑106 (MQ=255)                                                          caTCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGgag                                                                                                                                     <  1:305781/106‑1 (MQ=255)                                                          caTCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTcc                                                                                          >  6:206430/1‑149 (MQ=255)                                                           aTCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTccc                                                                                         <  5:199750/149‑1 (MQ=255)                                                            tCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCg                                                                                        >  7:21937/1‑149 (MQ=255)                                                                cGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTAcc                                                                                    >  5:58794/1‑149 (MQ=255)                                                                     aGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAg                                                                               <  7:8034/149‑1 (MQ=255)                                                                         gctgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGcaca                                                                           >  5:241142/1‑149 (MQ=255)                                                                                ttGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCaa                                                                    >  7:20875/2‑149 (MQ=255)                                                                                 tGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAAc                                                                   <  4:259473/149‑1 (MQ=255)                                                                                     cAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGc                                                               >  3:282411/1‑149 (MQ=255)                                                                                        gtccATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACcgc                                                                                  >  2:159182/3‑127 (MQ=255)                                                                                        gtccATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACcgc                                                                                  <  1:159182/125‑1 (MQ=255)                                                                                             catccagtcggaggtggcgtggcggtcggacttgcgcgacttcacggtaccggcgacTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACGACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGagac                                                        >  4:250018‑M2/58‑149 (MQ=255)                                                                                              atccagtcggaggtggcgtggcggtcggacttgcgcgacttcacggtaccggcgacTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACAcc                                                       >  7:149162‑M2/57‑149 (MQ=255)                                                                                                ccGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACcgcg                                                                                 >  1:218610/1‑120 (MQ=255)                                                                                                ccGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACcgcg                                                                                 <  2:218610/120‑1 (MQ=255)                                                                                                ccGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGa                                                                        >  4:309702/1‑129 (MQ=255)                                                                                                ccGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGa                                                                        <  3:309702/129‑1 (MQ=255)                                                                                                   TCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGc                                                 >  8:20875‑M1/1‑149 (MQ=255)                                                                                                       cGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACg                                             <  6:241142/149‑1 (MQ=255)                                                                                                          gtggcgtggcggtcggacttgcgcgacttcacggtaccggcgacTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGaa                                           <  8:149162‑M2/105‑1 (MQ=255)                                                                                                                       gcgcAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGTAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCgg                                 >  2:111750/1‑146 (MQ=255)                                                                                                                        cgcAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCAACGAAGACTTCTCGGAAGa                             >  6:222695/1‑149 (MQ=255)                                                                                                                                cGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTAcc                     >  4:97444/1‑149 (MQ=255)                                                                                                                                      ccacgccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCAccc               >  4:141245/1‑149 (MQ=255)                                                                                                                                       cacgccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGcac                                                                            <  4:69751/87‑1 (MQ=255)                                                                                                                                       cacgccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGcac                                                                            >  3:69751/1‑87 (MQ=255)                                                                                                                                       cacgccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCt              <  6:58794/149‑1 (MQ=255)                                                                                                                                           ccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGAcc          <  5:206430/149‑1 (MQ=255)                                                                                                                                                  cgacTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGt     <  3:97444‑M2/143‑1 (MQ=255)                                                                                                                                                  cgacTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTg    <  3:141245‑M2/144‑1 (MQ=255)                                                                                                                                                   gacTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGa  <  5:222695‑M2/146‑1 (MQ=255)                                                                                                                                                    acTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGaa                                           <  1:89776‑M2/105‑1 (MQ=255)                                                                                                                                                    acTGGATGGAAATGGAGAAGAAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGaa                                           >  2:89776‑M2/3‑107 (MQ=255)                                                                                                                                                      |                                                                                                                                                  AGTCGCGAAGCGCCGCACTTTCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGA‑AGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGA  >  NC_002947/1011609‑1011902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.