New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1136258 =	61 (1.240)	4 (0.090)	3/242	NT	6.6%	coding (717/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein
	?	NC_002947	1136328 =	55 (1.180)					coding (647/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein

TAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGC  >  NC_002947/1136181‑1136471                                                                                                                                                    |                                                                                                                                                gatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                                                                                                 >  7:156094‑M1/78‑148 (MQ=255) gatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                                                                                                 >  4:231647‑M1/78‑148 (MQ=255)  atgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                                                                               >  3:83942‑M1/77‑149 (MQ=255)   gCCGAACAGCTCGCTTTCGGCCAGGCTCTCGTGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                                                                               <  8:191980/148‑1 (MQ=255)   gCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                                                                               <  4:275799/148‑1 (MQ=255)    ccGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTg                                                                                                                                              >  8:64360/1‑148 (MQ=255)     cGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCa                                                                                                                                            >  7:188407/1‑149 (MQ=255)      gAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCAt                                                                                                                                           >  8:158495/1‑149 (MQ=255)              cGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGATCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCa                                                                                                                                   >  8:185001/1‑149 (MQ=255)               gCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAg                                                                                                                                  >  6:204407/1‑149 (MQ=255)               gCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAg                                                                                                                                  >  4:256781/1‑149 (MQ=255)                    cGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAc                                                                                                                              <  8:188407/148‑1 (MQ=255)                     ggCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgc                                                                                                                            <  7:31538/149‑1 (MQ=255)                        cAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGt                                                                                                                          >  5:234232/1‑148 (MQ=255)                        cAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTa                                                                                                                         <  7:64360/149‑1 (MQ=255)                           gCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGc                                                                                                                                 <  6:43670/138‑1 (MQ=255)                           gCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGc                                                                                                                                 >  5:43670/1‑138 (MQ=255)                               tcGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGcgcg                                                                                                                  >  3:250328/1‑149 (MQ=255)                                cGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGt                                                                                                                          >  6:267881/1‑140 (MQ=255)                                cGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGt                                                                                                                          <  5:267881/140‑1 (MQ=255)                                 gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGgcgc                                                                                                                   <  3:256781/146‑1 (MQ=255)                                 gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCggg                                                                                                                >  4:73546/1‑149 (MQ=255)                                   gCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGcc                                                                                                              <  8:165166/149‑1 (MQ=255)                                       cgcgGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCtt                                                                                                            >  5:49332/1‑147 (MQ=255)                                       cgcgGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGa                                                                                                          <  7:88372/149‑1 (MQ=255)                                           gcgcAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGt                                                                                                      >  2:93901/1‑149 (MQ=255)                                                 ttCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGAt                                                                                                <  6:234232/149‑1 (MQ=255)                                                    aGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGc                                                                                             >  7:278113/1‑149 (MQ=255)                                                     gggCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCAACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGAGGATGGcc                                                                                            >  2:97577/1‑149 (MQ=255)                                                      ggCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCg                                                                                           >  8:124677/1‑149 (MQ=255)                                                        ccAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGc                                                                                         >  2:209349/1‑149 (MQ=255)                                                           ggAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGAc                                                                                      <  7:124677/149‑1 (MQ=255)                                                                      gCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGc                                                                             >  5:192436/1‑147 (MQ=255)                                                                      gCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCaa                                                                           <  7:158495/149‑1 (MQ=255)                                                                       cATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAg                                                                          <  7:83714/149‑1 (MQ=255)                                                                       cATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAg                                                                          <  1:93901/149‑1 (MQ=255)                                                                        aTGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGcc                                                                                 <  8:39325/141‑1 (MQ=255)                                                                        aTGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGcc                                                                                 >  7:39325/1‑141 (MQ=255)                                                                          ggcggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGcc                                                                                 <  8:280953/139‑1 (MQ=255)                                                                          ggcggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGcc                                                                                 >  7:280953/1‑139 (MQ=255)                                                                           accgctgctggtgcatggcgagaccggcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCAt                                                                      >  3:83942‑M2/74‑149 (MQ=255)                                                                            cggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCAt                                                                      <  7:185001/148‑1 (MQ=255)                                                                             ggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGcc                                                                                 <  1:250759/136‑1 (MQ=255)                                                                             ggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGcc                                                                                 >  2:250759/1‑136 (MQ=255)                                                                             cgctgctggtgcatggcgagaccggcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATc                                                                     >  7:156094‑M2/72‑148 (MQ=255)                                                                             cgctgctggtgcatggcgagaccggcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATc                                                                     >  4:231647‑M2/72‑148 (MQ=255)                                                                                   TGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCt                                                              <  5:250343‑M1/149‑1 (MQ=255)                                                                                                  cgcgGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtggtcgtgg                                               <  5:204407/149‑1 (MQ=255)                                                                                                     gcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGc                                            <  8:156094‑M2/102‑1 (MQ=255)                                                                                                      ggCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCa                                           <  4:250328/149‑1 (MQ=255)                                                                                                        cTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAgg                                         <  8:180828/149‑1 (MQ=255)                                                                                                         tACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCaa                                                                           <  8:132634/114‑1 (MQ=255)                                                                                                         tACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCaa                                                                           >  7:132634/1‑114 (MQ=255)                                                                                                              gTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGa                                    >  7:121826/1‑148 (MQ=255)                                                                                                              gTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGa                                    >  7:233250/1‑148 (MQ=255)                                                                                                                  tttACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGACCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGc                               >  5:33456/1‑149 (MQ=255)                                                                                                                    tACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGt                             >  1:305205/1‑149 (MQ=255)                                                                                                                      ccGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTc                           >  5:75459/1‑149 (MQ=255)                                                                                                                       cGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCg                              >  3:27172/1‑145 (MQ=255)                                                                                                                       cGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCg                              <  4:27172/145‑1 (MQ=255)                                                                                                                        ggTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGc                         <  8:121826/149‑1 (MQ=255)                                                                                                                        ggTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGc                         <  6:49332/149‑1 (MQ=255)                                                                                                                          tGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGcc                        >  1:243779/1‑148 (MQ=255)                                                                                                                            ccGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCAACGCGTAAGGCTCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCTGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCa                      >  5:29678/1‑148 (MQ=255)                                                                                                                             cGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATa                    <  3:73546/149‑1 (MQ=255)                                                                                                                                    gCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCCGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAg             <  8:278113/149‑1 (MQ=255)                                                                                                                                         gCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtggtcgtggt                                              >  1:213839/1‑111 (MQ=255)                                                                                                                                         gCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtggtcgtggt                                              <  2:213839/111‑1 (MQ=255)                                                                                                                                          cACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTTGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGt       <  1:97577/149‑1 (MQ=255)                                                                                                                                               gcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGACCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGc  <  6:33456‑M2/144‑1 (MQ=255)                                                                                                                                                cagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTTGGTACAGc  <  3:231647‑M2/144‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                TAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGC  >  NC_002947/1136181‑1136471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.