| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2301454 | 0 (0.000) | 35 (0.720) | 30/252 | NT | 100% | intergenic (‑98/‑233) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| ? | NC_002947 | 5545321 = | NA (NA) | intergenic (‑461/+416) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB | |||||
Only 100 of 118 total aligned reads displayed.
GGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGG > NC_002947/5545173‑5545459 | ggACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtctt < 8:140385/149‑1 (MQ=11) cGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCCATcaaa < 8:82702/149‑1 (MQ=21) tCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaaca > 1:139323/1‑148 (MQ=38) ggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACaaaa < 6:70719/147‑1 (MQ=40) ctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAc < 2:185372/148‑1 (MQ=255) ggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTa > 1:183807/1‑130 (MQ=33) ttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTg > 2:149874/1‑149 (MQ=255) gAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttc > 2:256327/1‑149 (MQ=255) ctcctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttcttt < 1:149874/149‑1 (MQ=255) tcctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTTATGTGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc < 3:296762/149‑1 (MQ=255) ctcAAGACCTTGTTCAACATCAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGTGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGGCTTCTATCAAACAAAAGATAACCCACTGttctttc < 5:237200/147‑1 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCTGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc < 8:42367/147‑1 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc < 4:116092/147‑1 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttc > 5:205182/1‑143 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttc < 6:205182/143‑1 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 6:38966/149‑1 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 6:34274/149‑1 (MQ=255) tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTGTAg > 4:84619/1‑149 (MQ=255) tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg > 6:230063/1‑149 (MQ=255) aaGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAg > 8:119754/1‑126 (MQ=255) ccTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtcttct < 6:125120/110‑1 (MQ=32) ccTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtcttct > 5:125120/1‑110 (MQ=32) cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtcttc > 1:289226/1‑108 (MQ=31) cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtcttc < 2:289226/108‑1 (MQ=31) ttGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 5:174753/140‑1 (MQ=255) ttGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa > 6:174753/1‑140 (MQ=255) gTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaaaaa < 4:15085/148‑1 (MQ=255) gTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc > 6:11274/1‑149 (MQ=255) ttCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaaaaa > 5:88648/1‑147 (MQ=255) ttCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc < 1:294270/148‑1 (MQ=255) ttCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc < 4:239789/148‑1 (MQ=255) ttCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa < 2:129588/149‑1 (MQ=255) tCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa < 7:49039/148‑1 (MQ=255) cAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg < 1:289504/148‑1 (MQ=255) aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc < 4:35903/149‑1 (MQ=255) aGCCTGCTTCTTGGTTAACAGGTTGTACAACAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGTTAATTTATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGcgcgcg < 1:256327/149‑1 (MQ=21) gCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACaaaa > 6:100075/1‑106 (MQ=255) gCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACaaaa < 5:100075/106‑1 (MQ=255) gCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCggg > 5:132348/1‑149 (MQ=255) tGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGt > 4:76519/1‑148 (MQ=255) ttcttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa < 1:213273/133‑1 (MQ=255) ttcttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa > 2:213273/1‑133 (MQ=255) ttcttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAAt > 3:125550/1‑149 (MQ=255) cttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg < 3:76519/148‑1 (MQ=255) ttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc < 3:71422/129‑1 (MQ=255) ttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc > 4:71422/1‑129 (MQ=255) tGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGa > 7:167919/1‑98 (MQ=255) tGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGa < 8:167919/98‑1 (MQ=255) ggTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggcgg > 2:50831/1‑149 (MQ=255) ggTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggcg < 6:70192/148‑1 (MQ=255) gTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggcggc < 5:230063/149‑1 (MQ=255) gTTAAAAGGTTGAACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggcggc < 4:205868/149‑1 (MQ=255) ttAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggcggc > 4:61949/1‑148 (MQ=255) aaCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc < 3:80859/123‑1 (MQ=255) aCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGaa < 5:155859/148‑1 (MQ=255) gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGtt > 2:71228/1‑149 (MQ=255) gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGtt > 8:64199/1‑149 (MQ=255) gTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCa < 3:61949/148‑1 (MQ=255) acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtg > 3:194490/1‑140 (MQ=255) acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtg < 4:194490/140‑1 (MQ=255) acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgt < 4:69577/139‑1 (MQ=255) acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgt > 3:69577/1‑139 (MQ=255) cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgt > 2:116047/1‑137 (MQ=255) cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgt < 1:116047/137‑1 (MQ=255) cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttct < 6:41463/149‑1 (MQ=255) cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttc > 6:78541/1‑148 (MQ=255) aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACTGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCta < 5:11274/149‑1 (MQ=255) aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCta < 1:308644/149‑1 (MQ=255) tGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGt > 2:270170/1‑149 (MQ=255) ccAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTgg < 1:71228/149‑1 (MQ=255) cAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggc < 1:282050/120‑1 (MQ=255) cAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggc > 2:282050/1‑120 (MQ=255) cAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTgg > 3:253255/1‑148 (MQ=255) aTGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAACCAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTcaca < 4:67638/147‑1 (MQ=255) cgcAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCaa < 4:253255/148‑1 (MQ=255) gcAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGc > 6:205987/1‑149 (MQ=255) gCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGaa < 2:31604/110‑1 (MQ=255) gCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGaa > 1:31604/1‑110 (MQ=255) tttGATTCCCCATCTTGT‑AACCATACCAGAAAGTCTTCTATCAAACAAAAGAAAACCAACTGATCTTTCTAGAGAAAAAAACAACCGCCCTCGTTCAAAGGATCCCAAGTCATCACTCATCAATACCTGGTACCAGCACGCTGTGCCGa > 8:64637/1‑149 (MQ=255) tttGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGa > 3:18596/1‑149 (MQ=255) tttGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTCCTATACGTGGTCACAGCAAGCTGTGCCGa > 3:225858/1‑149 (MQ=255) ttGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGa > 7:212404/1‑148 (MQ=255) tGATGGCGCAGCTGGT‑ATCCATTCGAGACAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCTTGCtgtgacca < 4:222941/147‑5 (MQ=255) gATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 8:124071/68‑1 (MQ=255) gATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa > 7:124071/1‑68 (MQ=255) gATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCtat > 4:271223/1‑121 (MQ=255) gATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCtat < 3:271223/121‑1 (MQ=255) gATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTCCTATACGTGGTCACAGCAAGCTGTGCCGACa < 4:225858/148‑1 (MQ=255) aTGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAg < 6:132348/148‑1 (MQ=255) tGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAggg < 4:125550/149‑1 (MQ=255) tGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAggg < 5:78541/149‑1 (MQ=255) aGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAAc < 6:293708/149‑1 (MQ=255) t‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAt < 4:18596/149‑1 (MQ=255) cagtCGAGTCCGTCTTCTATCAAACACAAGATCACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGGCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCa < 8:56566/146‑1 (MQ=11) cATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCa > 5:248084/1‑149 (MQ=40) aTTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttc > 7:29437/1‑99 (MQ=255) ttCGAGTAAGTCTTCTATCAAACAAACGATAACCCAGTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCTATGGCGTCGAAGTGTTCACTCTTCTATACGTGGTCAGAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCAtt < 7:64637/149‑1 (MQ=11) gAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTgg < 1:50831/149‑1 (MQ=35) gAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTgg < 8:212404/149‑1 (MQ=35) gAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTgg > 3:144099/1‑149 (MQ=35) | GGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGG > NC_002947/5545173‑5545459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |