New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3493750	45 (0.910)	3 (0.060)	3/246	NT	6.1%	coding (453/1821 nt)	PP_3097	hypothetical protein
	?	NC_002947	= 3493773	49 (1.030)					coding (430/1821 nt)	PP_3097	hypothetical protein

GCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGTGCCTGCCCAGGCT  >  NC_002947/3493628‑3493917                                                                                                                                                   |                                                                                                                                                 gCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAgg                                                                                                                                                >  5:38543‑M2/1‑146 (MQ=255)  cTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAggcc                                                                                                                                              <  8:277988‑M2/149‑5 (MQ=255)  cTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAggcc                                                                                                                                              >  8:242129‑M2/1‑145 (MQ=255)  cTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAggcc                                                                                                                                              >  8:237697‑M2/1‑145 (MQ=255)  cTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAggcc                                                                                                                                              <  7:242129‑M2/149‑5 (MQ=255)  cTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAggcc                                                                                                                                              <  7:237697‑M2/149‑5 (MQ=255)   ttCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGa                                                                                                                                                  >  5:268652/1‑144 (MQ=255)   ttCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGa                                                                                                                                                  <  6:268652/144‑1 (MQ=255)     cGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCctg                                                                                                                                            <  3:161910/148‑1 (MQ=255)         gTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCa                                                                                                                                       >  2:266955/1‑149 (MQ=255)             gacatgaaCCGCCTGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACgg                                                                                                                                    >  8:3147/6‑148 (MQ=255)                   aaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCgg                                                                                                                             >  5:131297/1‑149 (MQ=255)                      cGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCca                                                                                                                          <  6:131297/149‑1 (MQ=255)                                    gTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCggg                                                                                                             >  6:111742/1‑148 (MQ=255)                                    gTCCATCTGCCCGAACAGGGCATCGCCAGTGCCTGCCAGGCGGAAGCGCAGACCAGCTACCAGGTAGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTACCATTACTCTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTAcagcg                                                                                                             >  4:231292/1‑144 (MQ=255)                                       cATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTAcc                                                                                                                >  2:173316/1‑142 (MQ=255)                                       cATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTAcc                                                                                                                <  1:173316/142‑1 (MQ=255)                                       cATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGc                                                                                                         <  1:167362/149‑1 (MQ=255)                                             cccGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCTACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGc                                                                                                   >  6:305466/1‑149 (MQ=255)                                              ccGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCg                                                                                                  >  6:31833/1‑149 (MQ=255)                                                    aGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAAttt                                                                                            >  7:5037/1‑149 (MQ=255)                                                      ggCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGc                                                                                          <  7:277988/149‑1 (MQ=255)                                                         aTCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGcaca                                                                                       <  5:305466/149‑1 (MQ=255)                                                           cGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAg                                                                                                       >  5:171318/1‑131 (MQ=255)                                                           cGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAg                                                                                                       <  6:171318/131‑1 (MQ=255)                                                            gCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCAcacca                                                                                    <  5:31833/149‑1 (MQ=255)                                                             ccAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGcacaaggc                                                                                   >  1:140894/1‑145 (MQ=255)                                                              cAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGt                                                                                                            <  1:207534/123‑1 (MQ=255)                                                              cAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGt                                                                                                            >  2:207534/1‑123 (MQ=255)                                                                     tgacatgCGTATGCTCAGACGAGCGACCAGGTCTGC‑GCTGTGCCAGTTGAAGGCCGAGCTTTCCATTTCTGTGAACGAGGCCTGCTTCACGGCAATCGTCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGcac                                                                                        <  2:211210/130‑1 (MQ=255)                                                                     tGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCTGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGcac                                                                                        >  1:211210/1‑137 (MQ=255)                                                                     tGCCAGGCGGATGCGCAGACGACCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACACCACTACCCGGTAGCAGGTGCGGAACTTGCCCAACACGACTTcaa                                                                           >  7:215578/1‑147 (MQ=255)                                                                       ccAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACg                                                                         <  1:305070/149‑1 (MQ=255)                                                                         aGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACgg                                                                        >  1:272796/1‑148 (MQ=255)                                                                                  cgcAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGgcat                                                               <  3:19169/148‑1 (MQ=255)                                                                                   gcAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACgg                                                                                                                                    >  4:139902/1‑78 (MQ=255)                                                                                   gcAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACgg                                                                                                                                    <  3:139902/78‑1 (MQ=255)                                                                                         gAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCg                                                       >  5:266300/1‑149 (MQ=255)                                                                                                  ggTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGgcgc                                              <  2:272796/149‑1 (MQ=255)                                                                                                  ggTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGgcgc                                              >  7:207287/1‑149 (MQ=255)                                                                                                     cGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGgcgcgc                                            >  8:116406/1‑148 (MQ=255)                                                                                                              tgCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCgg                                     >  7:193617/1‑147 (MQ=255)                                                                                                                  cGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAggccttcaacgggcacagcgccgacctggtcgctcgtctgcgcatccgcctggcagccactggcgatgccctgttcgggcagatggacatgaaccgcctgcggttcttcctcgac                               <  8:162437‑M2/149‑116 (MQ=255)                                                                                                                   gTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCtt                              <  7:3147/149‑1 (MQ=255)                                                                                                                      gAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCg                            <  6:266300/148‑1 (MQ=255)                                                                                                                       aaGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGt                          >  7:261443/1‑149 (MQ=255)                                                                                                                        aGGCCGAGCGTTCCATTTCTGTGAACGAggccttcaacgggcacagcgccgacctggtcgctcgtctgcgcatccgcctggcagccactggcgatgccctgttcgggcagatggacatgaa                                                     >  3:57452‑M2/1‑28 (MQ=255)                                                                                                                        aGGCCGAGCGTTCCATTTCTGTGAACGAggccttcaacgggcacagcgccgacctggtcgctcgtctgcgcatccgcctggcagccactggcgatgccctgttcgggcagatggacatgaa                                                     <  4:57452‑M2/121‑94 (MQ=255)                                                                                                                              aGCGTTCCATTTCTGTTAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGCTACCAGGTGCGGAACTAGCACACCACGCCTTCCACGGGAATGGCATCCATCTCGGTATGGCCCGCGACGCGCTAGGCATCGGTGACtttt                   >  5:45764/1‑149 (MQ=255)                                                                                                                                 gTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACt                      <  4:302916/143‑1 (MQ=255)                                                                                                                                 gTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACt                      >  3:302916/1‑143 (MQ=255)                                                                                                                                  ttCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGt               >  6:39467/1‑149 (MQ=255)                                                                                                                                   tCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCg                                                       >  6:3801/1‑108 (MQ=255)                                                                                                                                   tCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCg                                                       <  5:3801/108‑1 (MQ=255)                                                                                                                                       tttCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGtgcctg          <  5:39467/149‑1 (MQ=255)                                                                                                                                          cTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGtgcctgcc        <  5:111742/148‑1 (MQ=255)                                                                                                                                          cTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGt               <  3:13311/141‑1 (MQ=255)                                                                                                                                          cTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGt               >  4:13311/1‑141 (MQ=255)                                                                                                                                            gtgAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGTGCCTGCCCAg     >  7:186506/1‑149 (MQ=255)                                                                                                                                             tgAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGTGCCTGccc       <  8:215578/146‑1 (MQ=255)                                                                                                                                             tgAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGTGCCTGCCCAgg    >  5:294062/1‑149 (MQ=255)                                                                                                                                               aaCGAggccttcaacgggcacagcgccgacctggtcgctcgtctgcgcatccgcctggcagccactggcgatgccctgttcgggcagatggacatgaaccgcctgcggttcttcctcgacggcgaagcgaccctgatgctgcagctgt   >  7:162437‑M2/1‑5 (MQ=255)                                                                                                                                               aaCGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGTGCCTGCCCAGGCt  >  5:242876/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGC‑GCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCACAGCTCTACCGGGTAGCAGGTGCGGAACTTGCACACCACGCCTTCCACGGGATTGGCATGCATCTCGGTATGGCGCGCGACGCGGTAGGCTTCGGTGACTTTTTCGTGCCTGCCCAGGCT  >  NC_002947/3493628‑3493917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.