New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4716967 =	36 (0.730)	3 (0.060)	3/240	NT	7.7%	coding (59/516 nt)	fabA	3R‑3‑hydroxydecanoyl‑ACP dehydratase
	?	NC_002947	4717006 =	38 (0.820)					coding (98/516 nt)	fabA	3R‑3‑hydroxydecanoyl‑ACP dehydratase

CGGGAAGATTCATCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATCC  >  NC_002947/4716864‑4717132                                                                                                                                               |                                                                                                                               cggGAAGATTCATCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGAt                                                                                                                          >  1:187663/1‑149 (MQ=255)        aTTCATCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGAt                                                                                                                   >  6:3101/1‑149 (MQ=255)         ttCATCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGAt                                                                                                                   <  6:268771/148‑1 (MQ=255)            aTCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCa                                                                                                               >  3:20259/1‑149 (MQ=255)             tCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCGTTTACTCGTGAAGACCTGCTGCGCTGCAGTCGCGGTTAGCTTTTCGTCACAGGTAATTCGCAACTGCACGCGCCGAACATGCTGATGGTCGATCgaa                                                                                                               >  4:239896/1‑146 (MQ=255)               cccTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCa                                                                                                            >  5:78831/1‑149 (MQ=255)                ccTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCAc                                                                                                           <  5:3101/149‑1 (MQ=255)                 cTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCAcc                                                                                                          <  8:145699/149‑1 (MQ=255)                    ccGCAGGGTGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGTTAATGCGCAACTGCACGCGCCGAACATGCTGATGGTCGATAGCATGACCCa                                                                                                        >  8:245347/1‑148 (MQ=255)                    ccGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCAccc                                                                                                         <  2:187663/147‑1 (MQ=255)                       cAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGATGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCatat                                                                                                     >  5:224662/1‑148 (MQ=255)                                       agCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCa                                                                                    <  4:20259/149‑1 (MQ=255)                                                 aCCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCg                                                                                                                     >  3:198864/1‑106 (MQ=255)                                                 aCCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCg                                                                                                                     <  4:198864/106‑1 (MQ=255)                                                      acaacaCGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGt                                                                      >  8:74281/1‑148 (MQ=255)                                                           acGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTg                                                                >  3:217445/1‑149 (MQ=255)                                                           acGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTg                                                                >  7:35965/1‑149 (MQ=255)                                                            gccgccttcttcgctgatatgggtgatgcgatcgaccatcagcaTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGc                                                                                                                              >  8:112815‑M1/45‑86 (MQ=255)                                                            gccgccttcttcgctgatatgggtgatgcgatcgaccatcagcaTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGc                                                                                                                              <  7:112815‑M1/42‑1 (MQ=255)                                                              ccTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTc                                                             <  7:74281/149‑1 (MQ=255)                                                                      cGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCt                                                     >  2:122738/1‑149 (MQ=255)                                                                       gggAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAg                                                                                                  >  1:91701/1‑103 (MQ=255)                                                                       gggAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAg                                                                                                  <  2:91701/103‑1 (MQ=255)                                                                       gggAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGc                                                      <  8:35965/147‑1 (MQ=255)                                                                            gACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGatat                                               <  1:122738/149‑1 (MQ=255)                                                                            gACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGatat                                               <  7:7766/149‑1 (MQ=255)                                                                               ctgctgCGCTGCAGTCGCGCTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGCCAAGTACGGCAAAGGTCAATTGGTCGCCGAGCTGCATATCa                                             >  4:262521/1‑148 (MQ=255)                                                                                  ctgcgctgcAGTCTCGTTGAGCTGTTCGGCCCATGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAAc                                           <  3:262521/147‑1 (MQ=255)                                                                                  ctgcgctgcAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAAc                                           <  6:224662/147‑1 (MQ=255)                                                                                   tgcgctgcAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGATGGATATCAACCCg                                        >  5:198941/1‑149 (MQ=255)                                                                                           aGTCGCGTGGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAAt                                                                  <  3:218870/115‑1 (MQ=255)                                                                                            gTCGCGGTGAGGTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTgg                               <  7:245347/149‑1 (MQ=255)                                                                                                     gcatgttcggcgcgggcagttgcgcattacctgggccgaacaTGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAggcggc                                                                                     >  8:112815‑M2/43‑86 (MQ=255)                                                                                                     gcatgttcggcgcgggcagttgcgcattacctgggccgaacaTGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAggcggc                                                                                     <  7:112815‑M2/44‑1 (MQ=255)                                                                                                        tgttcggcgcgggcagttgcgcattacctgggccgaacaTGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGc                   >  3:196535‑M2/40‑149 (MQ=255)                                                                                                          TTCGGCCCATGTAATGAGCAACTGCCCGAGCCGAACATGCTGATGGTCGATCTCATCACCCATATCAGCGAAGAAGGCGGCAAGTACTGCAAAGGTGAATTGGTCGCCGATCTGGATATCAACCCGGACCTGTGGTTCTTCTCCTg                    >  3:239896‑M1/1‑146 (MQ=255)                                                                                                                ccAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTg                                                    >  1:270514/1‑108 (MQ=255)                                                                                                                ccAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTg                                                    <  2:270514/108‑1 (MQ=255)                                                                                                                ccAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCg            >  3:5778/1‑148 (MQ=255)                                                                                                                 cAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGaa          <  6:198941/149‑1 (MQ=255)                                                                                                                  aGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAg         <  4:5778/149‑1 (MQ=255)                                                                                                                     tAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGc                                                      <  2:36261/101‑1 (MQ=255)                                                                                                                     tAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGc                                                      >  1:36261/1‑101 (MQ=255)                                                                                                                          cgcAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATcc  <  6:78831/148‑1 (MQ=255)                                                                                                                                               |                                                                                                                               CGGGAAGATTCATCCCCTGCCGCAGGGGGTTATTGAGGAGCTCGCATGACCAAACAACACGCCTTTACTCGGGAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCAGCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATCC  >  NC_002947/4716864‑4717132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.