| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,319,755 | C→T | 5.3% | intergenic (‑382/+27) | ilvI ← / ← PP_4681 | acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,319,755 | 0 | C | T | 5.3% | 288.3 / 2.4 | 94 | intergenic (‑382/+27) | ilvI/PP_4681 | acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (45/43); new base T (2/3); total (48/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
CGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTG > NC_002947/5319612‑5319899 | cGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGccc > 1:164243/1‑149 (MQ=255) gAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCtt > 2:14931/1‑149 (MQ=255) gTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGAc < 8:229528/149‑1 (MQ=255) gTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCCTGAc < 7:115109/149‑1 (MQ=255) ttGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACg > 2:169316/1‑149 (MQ=255) ttGGAATCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACg < 8:21628/149‑1 (MQ=255) taggATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGCCCACAATCTGCGCCCCTTGACg > 4:255718/3‑149 (MQ=255) ggATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGAGGCCCTTGACgg > 1:265935/1‑148 (MQ=255) gATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGaa < 2:175113/149‑1 (MQ=255) gATGCTTGTGATTCGGCGCCAACAAGTCACGAAAAATTATTGCCAATTTTTCCTCACGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCGCAGATTGTGGCCCtttttttt < 7:9111/148‑7 (MQ=255) ttCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGaaa > 8:160043/1‑148 (MQ=255) ttGTTATTCGGCGCCAACAATTCAATAAAAATTATTGCCTATTTTTCCTCAAGATGAATTCCTTCCACCACTAAAAATCGCTTCATCATCATAATTAATAAGATTTCCAAAAAAAAGGGCCGCAGATTGTGGCCCttttttttg < 6:139673/144‑8 (MQ=255) ttGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACt > 4:196710/1‑149 (MQ=255) gtgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTg < 2:164243/148‑1 (MQ=255) gtgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTg > 7:36693/1‑148 (MQ=255) tgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTgaa < 5:320609/149‑1 (MQ=255) gATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATATGCGGCCCTTGACGGaaaaaattaa > 3:189338/1‑143 (MQ=255) tCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTgaagaa > 7:168464/1‑148 (MQ=255) cgcCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAATATGAATTCCTGCCACCACAAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAAt < 1:44466/146‑1 (MQ=255) gcCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAgg < 3:196710/149‑1 (MQ=255) caacaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCg < 4:17405/149‑1 (MQ=255) caacaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCCGCGGCCCTTGACGGAAAAACTgaa > 4:188896/1‑138 (MQ=255) caacaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCCGCGGCCCTTGACGGAAAAACTgaa < 3:188896/138‑1 (MQ=255) caaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGaa < 2:78933/149‑1 (MQ=255) caaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGaa < 2:98134/149‑1 (MQ=255) gTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCa > 2:109320/1‑139 (MQ=255) aaGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTACAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGCCGGAAGGAGc > 7:125863/1‑148 (MQ=255) aGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCCGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTGGCCGGAAAAACGGCAGAAATCCGGCGGAAGGAGCgc > 4:202765/1‑148 (MQ=255) aGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGAAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGa > 3:187296/1‑149 (MQ=255) gAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGAt < 5:103000/149‑1 (MQ=255) aaTTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAAt < 1:14931/149‑1 (MQ=255) aaTTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAAt < 2:206951/149‑1 (MQ=255) ttattGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTg > 7:284937/1‑149 (MQ=255) attGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTgaa > 6:101838/1‑119 (MQ=255) attGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTgaa < 5:101838/119‑1 (MQ=255) attGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGa < 8:36693/148‑1 (MQ=255) ttGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCATAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATc < 7:160043/149‑1 (MQ=255) ttGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAATGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATc < 8:168464/149‑1 (MQ=255) ccAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTAGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCaa > 6:205943/1‑148 (MQ=255) cAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGc < 8:281462/133‑1 (MQ=255) cAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGc > 7:281462/1‑133 (MQ=255) cAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATATCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCaaa < 3:202765/148‑1 (MQ=255) aaTTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCCGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAg < 2:186523/149‑1 (MQ=255) tCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCaa > 3:68499/1‑147 (MQ=255) aaGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAgg > 6:249520/1‑149 (MQ=255) aGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggc < 1:48401/149‑1 (MQ=255) gATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggcg > 6:247315/1‑149 (MQ=255) gATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggcg > 8:2497/1‑149 (MQ=255) aaTTCATTCCACCTCTTAAAATCGGTTCACCAGCTGAATTAACAATATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCATTTGATCAAAAGCTGCCAACAGgcggcg < 3:255718/148‑1 (MQ=255) ttCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAg > 2:226055/1‑149 (MQ=255) cTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCt > 1:38863/1‑148 (MQ=255) ccaccaCTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCa < 5:247315/147‑1 (MQ=255) accacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCagtac > 6:301049/1‑145 (MQ=255) accacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGAc > 1:1379/1‑149 (MQ=255) accacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGAc > 4:281263/1‑149 (MQ=255) cacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACtt > 3:279275/1‑149 (MQ=255) acTAAAAATCGCTTCATCAGCATAATTAACAAGATATCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACATAAGAAATCAGTCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACttt < 4:189338/149‑1 (MQ=255) acTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCACCAGGCGGCGTAGCTCACgccgtt > 8:230371/1‑144 (MQ=255) cTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGACCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTg > 8:7784/1‑149 (MQ=255) tAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTg > 2:142592/1‑148 (MQ=255) aaaaTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGACCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTc < 7:7784/149‑1 (MQ=255) aaTCGCTTCAGCAGCAGAATTAACAAGATTTCCAAAAAACAGGCCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTccg < 8:284937/149‑1 (MQ=255) cTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGAt < 8:165738/102‑1 (MQ=255) cTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGAt > 7:165738/1‑102 (MQ=255) agcagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTCGCTCACGACTTTGCTCCGGCcggtcg < 1:169316/148‑1 (MQ=255) agcagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcgg < 1:142592/149‑1 (MQ=255) agcagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcgg < 2:265935/149‑1 (MQ=255) gcagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcggt < 2:38863/149‑1 (MQ=255) gcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTaaa > 6:24029/1‑149 (MQ=255) ttAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGt > 1:246860/1‑149 (MQ=255) ttAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGt > 5:250459/1‑149 (MQ=255) gaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg > 8:241137/1‑134 (MQ=255) gaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg < 7:241137/134‑1 (MQ=255) gaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCg > 6:85903/1‑149 (MQ=255) gaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCg > 6:157239/1‑149 (MQ=255) aTTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCa < 6:291172/149‑1 (MQ=255) ttCCAGAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAacac > 6:251555/1‑136 (MQ=255) ttCCAGAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAacac < 5:251555/136‑1 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg > 7:121975/1‑125 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg < 8:121975/125‑1 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtc < 5:83369/124‑1 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtc > 6:83369/1‑124 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGAGCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCgg > 3:104797/1‑141 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGACCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCgg < 4:104797/141‑1 (MQ=255) aaaaaaaaGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACaa < 4:68499/149‑1 (MQ=255) aaaaaaaaGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGGCGGTAAACACGGTTTCGGCCATGAc > 7:273166/1‑147 (MQ=255) aaaaaaaGGGCCACAATCTGTGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTaaa > 5:216416/1‑128 (MQ=255) tcaaGGGCCGCAGATTGTGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACaa < 8:238380/143‑1 (MQ=255) tcaaGGGCCGCAGATTGTGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACaa > 7:238380/3‑145 (MQ=255) aGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCt < 7:2497/149‑1 (MQ=255) gCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGa > 5:76719/1‑149 (MQ=255) ccACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGAt < 2:1379/149‑1 (MQ=255) aTCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCAtt < 5:24029/149‑1 (MQ=255) tCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTg > 7:80675/1‑149 (MQ=255) | CGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTG > NC_002947/5319612‑5319899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |