| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,325,511 | T→A | 7.0% | noncoding (133/149 nt) | PP_mr52 → | PrrF ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,325,511 | 0 | T | A | 7.0% | 217.7 / 4.4 | 71 | noncoding (133/149 nt) | PP_mr52 | PrrF ncRNA |
| Reads supporting (aligned to +/- strand): ref base T (33/33); new base A (3/2); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GGGGCAAAGGGATTGACGGCTAAATGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCCAGCAGCAATACCT > NC_002947/5325369‑5325659 | ggggCAAAGGGATTGACGGCTAAATGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCTGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGcc < 5:87787/148‑1 (MQ=255)ggggCAAAGGGATTGACGGCTAAATGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGcc < 2:206315/148‑1 (MQ=255) gggCAAAGGGATTGACGGCTAAATGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAAATTGCCgg < 7:231082/149‑1 (MQ=255) gggATTTACGGCTAAATTAGATTTGTTTTTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCtttt < 3:293711/149‑1 (MQ=255) ggATTGACGGCTAAATGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttt < 6:55538/149‑1 (MQ=255) aaTGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCtgtg < 1:83974/145‑1 (MQ=255) aaTGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCtgtg > 2:83974/1‑145 (MQ=255) aTGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttttt < 2:139232/137‑1 (MQ=255) aTGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttttt < 2:143965/137‑1 (MQ=255) aTGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttttt > 1:139232/1‑137 (MQ=255) aTGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttttt > 1:143965/1‑137 (MQ=255) gagaATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCtttt > 7:173510/1‑148 (MQ=255) agaATTGTTATTATTATCGCAACTGGTCGCGAGACAGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCATGTGCCtttt > 4:152483/1‑147 (MQ=255) ttattattaTCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGACGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAg > 7:297059/1‑149 (MQ=255) attattatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCAGGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAgcg > 5:248185/1‑149 (MQ=255) attattatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAgcg > 5:43912/1‑149 (MQ=255) attattatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAgc < 4:264767/148‑1 (MQ=255) attattatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCAGGCAATTTGCAGGGTCTTTTTTTGCCTGTGCCTTTTCATGATCAgcg > 8:137572/1‑149 (MQ=255) attatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttt > 3:10185/1‑120 (MQ=255) attatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCttttt < 4:10185/120‑1 (MQ=255) ttatCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGcgccgc > 4:60330/1‑149 (MQ=255) gCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGa > 3:16141/1‑134 (MQ=255) gCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGa < 4:16141/134‑1 (MQ=255) gCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGcgccgc > 3:184708/1‑144 (MQ=255) gCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGcgccgc < 4:184708/144‑1 (MQ=255) gCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTg > 2:214512/1‑149 (MQ=255) gCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCAGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATATGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTg > 2:169495/1‑149 (MQ=255) aaCTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCgg < 3:118879/104‑1 (MQ=255) aaCTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCgg > 4:118879/1‑104 (MQ=255) cTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGca < 6:43912/149‑1 (MQ=255) cTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGca < 8:187598/149‑1 (MQ=255) cgcgAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTc > 5:227939/1‑121 (MQ=255) cgcgAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTc < 6:227939/121‑1 (MQ=255) gagaCTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATc < 3:60330/149‑1 (MQ=255) gaCTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCt < 8:173510/149‑1 (MQ=255) gaCTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCt < 1:210130/149‑1 (MQ=255) gaCTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCt < 1:215212/149‑1 (MQ=255) aCTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTg > 7:116516/1‑149 (MQ=255) gATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCa > 5:123656/1‑149 (MQ=255) aTAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCAt > 2:66431/1‑149 (MQ=255) aGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATcgc < 8:116516/149‑1 (MQ=255) agagCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCgccgcc < 3:152483/148‑1 (MQ=255) agagCCCCTGGTTCGGACGCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGGCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATcgccgc < 4:179571/147‑1 (MQ=255) gCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCgtgt < 6:248185/149‑1 (MQ=255) ccccAGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAGTCCTGCTCCGGCATCGCCGCCGTGTa < 1:169495/149‑1 (MQ=255) cTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATc > 5:122645/1‑122 (MQ=255) cTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATc < 6:122645/122‑1 (MQ=255) cTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACca < 6:123656/149‑1 (MQ=255) gTTCGGACTCTCAGATTATCTCCTCATCATGCTAATCACTGTTATTGACCCGTCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCTCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACcaca < 6:263478/148‑1 (MQ=255) ttCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTCCTCCGGCATCGCCGCCGTGTACcacaca < 1:176382/149‑1 (MQ=255) tcAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATc < 3:31359/109‑1 (MQ=255) tcAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATc > 4:31359/1‑109 (MQ=255) cAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCt > 4:276121/1‑149 (MQ=255) cctcATCAGGCTAATCACGGTTATTGACCCGGCAATTTGcc < 2:78123/41‑1 (MQ=255) cctcATCAGGCTAATCACGGTTATTGACCCGGCAATTTGcc > 1:78123/1‑41 (MQ=255) ctcATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCATCGCCAGGCTCg > 1:205349/1‑149 (MQ=255) ggCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTtcgct > 2:168760/1‑149 (MQ=255) aTCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGcc < 3:276121/148‑1 (MQ=255) aTCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGcc < 1:214512/148‑1 (MQ=255) aaaaaaagACCCGGCAAATTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCt > 5:146952/8‑148 (MQ=255) gTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCt > 3:210731/1‑147 (MQ=255) aaaaaagACCCGGCAAATTGGCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCCCACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCt > 7:35355/7‑147 (MQ=255) ttATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTcag > 5:68452/1‑149 (MQ=255) agACCCGGCAAATTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCg < 7:98522/125‑1 (MQ=255) agACCCGGCAAATTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCg > 8:98522/2‑126 (MQ=255) ccGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCcagcag > 1:246365/1‑148 (MQ=255) cGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCCagcagc > 4:128549/1‑148 (MQ=255) ggCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCCAGCAGCaa > 6:275220/1‑149 (MQ=255) gCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCCAGCAGCaa > 2:20612/1‑148 (MQ=255) aaTTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTca > 7:32953/1‑135 (MQ=255) aaTTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTca < 8:32953/135‑1 (MQ=255) tttGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCCAGCAGCAATACCt < 8:297059/149‑1 (MQ=255) | GGGGCAAAGGGATTGACGGCTAAATGAGAATTGTTATTATTATCGCAACTGGTCGCGAGACTGGTTGGATAAGCTAAGAGCCCCTGGTTCGGACTCTCAGATTATCTCCTCATCAGGCTAATCACGGTTATTGACCCGGCAATTTGCCGGGTCTTTTTTTGCCTGTGCCTTTTCAGGATCAGCGCCGCAGCTGCGCACAATAATCCTGCTCCGGCATCGCCGCCGTGTACCACACATAATCAGCCTCGCCAGGCTCGGTTCGCTCGCCCACCTCAGCCAGCAGCAATACCT > NC_002947/5325369‑5325659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |