Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,373,225	A→G	7.2%	noncoding (59/82 nt)	PP_mr55 →	P31 ncRNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,373,225	0	A	G	7.2%	195.3 / 4.9	70	noncoding (59/82 nt)	PP_mr55	P31 ncRNA
Reads supporting (aligned to +/- strand):  ref base A (35/29);  new base G (2/3);  total (38/32)
Fisher's exact test for biased strand distribution p-value = 6.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.82e-01

TACCACCTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGA  >  NC_002947/5373077‑5373367                                                                                                                                                     |                                                                                                                                               tACCACCTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGa                                                                                                                                                <  1:161486/149‑1 (MQ=255) tACCACCTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGa                                                                                                                                                <  1:285385/149‑1 (MQ=255) tACCACCTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGa                                                                                                                                                >  7:70689/1‑149 (MQ=255)    caccTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGCGTg                                                                                                                                             >  8:282401/1‑149 (MQ=255)    caccTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGt                                                                                                                                              >  1:100810/1‑148 (MQ=255)    caccTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTg                                                                                                                                             <  5:13785/149‑1 (MQ=255)         cACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTa                                                                                                                                        >  8:179357/1‑149 (MQ=255)          aCCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTAt                                                                                                                                       <  8:229396/149‑1 (MQ=255)           ccAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATg                                                                                                                                      <  7:179357/149‑1 (MQ=255)             aaCGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGtgtcca                                                                                                                                    >  3:36868/1‑144 (MQ=255)                       ccGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCAccc                                                                                                                          >  5:256923/1‑149 (MQ=255)                        cGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCTAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCActcc                                                                                                                         <  4:76593/149‑1 (MQ=255)                             gCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCACTCCGCttt                                                                                                                    <  4:36868/149‑1 (MQ=39)                                 cGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATAGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCAtg                                                                                                                >  4:46981/1‑149 (MQ=255)                                        ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCACTCCGCtttt                                                                                                                   <  7:67119/139‑2 (MQ=38)                                        ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCACTCCGCtttt                                                                                                                   >  8:67119/1‑138 (MQ=38)                                        ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaa                                                                                                         >  6:188620/1‑149 (MQ=255)                                        ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCGGaa                                                                                                         >  4:46015/1‑149 (MQ=255)                                          cACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaa                                                                                                         <  5:205607/147‑1 (MQ=255)                                            ccGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTACCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGAGGTATGGACACTTCACCCCGCTTTCATGAACTGaattc                                                                                                      >  8:184291/1‑148 (MQ=255)                                             cgcgGAAAAAACTGCCGTCGGCAAGGGCCAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGCAGTGACGTATGGACACGTCACCCCGCTTTCATGTGATGaattcaa                                                                                                    >  6:268379/1‑149 (MQ=255)                                              gcgGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGacac                                                                                                                                 <  7:280418/119‑1 (MQ=255)                                              gcgGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGAGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGacac                                                                                                                                 >  8:280418/1‑119 (MQ=255)                                                      tACTGCAGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTgcg                                                                                           >  2:49449/1‑149 (MQ=255)                                                        cTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTgcgcg                                                                                         <  7:173884/149‑1 (MQ=255)                                                         tGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCtt                                                                                                                     >  7:220922/1‑120 (MQ=255)                                                         tGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCtt                                                                                                                     <  8:220922/120‑1 (MQ=255)                                                            cGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCttt                                                                                     <  8:70689/149‑1 (MQ=255)                                                                ggCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGt                                                                                 >  5:279192/1‑149 (MQ=255)                                                                 gCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTg                                                                                >  5:242746/1‑149 (MQ=255)                                                                  cAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCCCGCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGGTTTTAGTg                                                                                >  5:25313/1‑148 (MQ=255)                                                                  cAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGACACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTgg                                                                               <  2:179339/149‑1 (MQ=255)                                                                     gggCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTg                                                                                <  1:138160/145‑1 (MQ=255)                                                                     gggCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTg                                                                                >  2:138160/1‑145 (MQ=255)                                                                      ggCGAGTTTGGCTGGCTTTGTCAAGAAGACGTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTAGGGACACGTCAGCCGGCTGTCAGGTGCTGAATTCAATTAGCTGCGCGCTTTTAGTGGacac                                                                           >  8:129239/1‑149 (MQ=255)                                                                         gAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGacacac                                                                         >  2:308766/1‑148 (MQ=255)                                                                           gTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTa                                                                       >  4:247360/1‑148 (MQ=255)                                                                            tATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTaaa                                                                     <  4:262445/149‑1 (MQ=255)                                                                                gctggctTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCt                                                                  <  6:242746/148‑1 (MQ=255)                                                                                    gctTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTa                                                               <  1:49449/147‑1 (MQ=255)                                                                                            aagaagACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGa                                                      >  4:97136/1‑148 (MQ=255)                                                                                               aagaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAg                                                                    >  6:10531/1‑131 (MQ=255)                                                                                               aagaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAg                                                                    <  5:10531/131‑1 (MQ=255)                                                                                                 gaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGc                                                             >  3:135611/1‑136 (MQ=255)                                                                                                 gaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGc                                                             <  4:135611/136‑1 (MQ=255)                                                                                                   ccTCCCGTAAATCAAGCATGAAAGGGCGATCTCAGGTTTCAAAAAAGCGGAGTGACGTATTGACACTTGACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgtgtg                                              <  5:268379/149‑1 (MQ=255)                                                                                                      cccGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattcaat                                                                                                   <  8:160203/93‑1 (MQ=255)                                                                                                      cccGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattcaat                                                                                                   >  7:160203/1‑93 (MQ=255)                                                                                                         gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgtgt                                               >  1:22149/1‑142 (MQ=255)                                                                                                         gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgtgt                                               <  2:22149/142‑1 (MQ=255)                                                                                                         gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgt                                                 >  3:234037/1‑140 (MQ=255)                                                                                                         gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgt                                                 <  4:234037/140‑1 (MQ=255)                                                                                                           aaaTCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTAc                                                         >  2:59516/1‑130 (MQ=255)                                                                                                           aaaTCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTAc                                                         <  1:59516/130‑1 (MQ=255)                                                                                                            aaTCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGt                                      <  3:247360/148‑1 (MQ=255)                                                                                                              tCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTa                                   >  1:278397/1‑149 (MQ=255)                                                                                                               cAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACAACGTAAAGATTTACATTAATGAAAAGTGTTTTTGCGTTATAc                                  >  1:185973/1‑149 (MQ=255)                                                                                                                  gCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACACCGCTTTCATGTGCTGAATACAATTCGCTGCGCGC‑TTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACcgcg                              >  1:46945/1‑149 (MQ=255)                                                                                                                   cATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACcgcg                              >  5:603/1‑149 (MQ=255)                                                                                                                      gAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattc                                                                                                      >  7:269015/1‑74 (MQ=255)                                                                                                                      gAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattc                                                                                                      <  8:269015/74‑1 (MQ=255)                                                                                                                      gAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCACGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAt                           >  2:107757/1‑149 (MQ=255)                                                                                                                       aaaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAt                           <  6:279192/148‑1 (MQ=255)                                                                                                                       aaaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAt                           <  7:285996/148‑1 (MQ=255)                                                                                                                        aaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGAGACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAtgt                         >  6:27284/1‑149 (MQ=255)                                                                                                                        aaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGATTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAtgt                         >  2:78229/1‑149 (MQ=255)                                                                                                                          gggCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATgtgt                       <  7:163047/149‑1 (MQ=255)                                                                                                                                 cGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTaa                 >  4:266264/1‑148 (MQ=255)                                                                                                                                   cAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTaaa                                                                     >  5:43196/1‑94 (MQ=255)                                                                                                                                   cAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTaaa                                                                     <  6:43196/94‑1 (MQ=255)                                                                                                                                   cAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAac              <  5:188620/149‑1 (MQ=255)                                                                                                                                     ggTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAacac            <  2:278397/149‑1 (MQ=255)                                                                                                                                               aaGCGGACTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTCTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCTATGCGa  <  6:25313/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               TACCACCTCACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGA  >  NC_002947/5373077‑5373367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑