| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,373,233 | A→G | 9.8% | noncoding (67/82 nt) | PP_mr55 → | P31 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,373,233 | 0 | A | G | 9.8% | 192.4 / 10.2 | 71 | noncoding (67/82 nt) | PP_mr55 | P31 ncRNA |
| Reads supporting (aligned to +/- strand): ref base A (35/29); new base G (3/4); total (38/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.21e-01 | |||||||||||
CACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCT > NC_002947/5373085‑5373380 | cACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTa > 8:179357/1‑149 (MQ=255) aCCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTAt < 8:229396/149‑1 (MQ=255) ccAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATg < 7:179357/149‑1 (MQ=255) ccGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCAccc > 5:256923/1‑149 (MQ=255) cGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCTAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCActcc < 4:76593/149‑1 (MQ=255) gCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCACTCCGCttt < 4:36868/149‑1 (MQ=39) cGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATAGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCAtg > 4:46981/1‑149 (MQ=255) ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCACTCCGCtttt < 7:67119/139‑2 (MQ=38) ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGGGTGACGTGTCCATACGTCACTCCGCtttt > 8:67119/1‑138 (MQ=38) ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaa > 6:188620/1‑149 (MQ=255) ttCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCGGaa > 4:46015/1‑149 (MQ=255) cACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaa < 5:205607/147‑1 (MQ=255) ccGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTACCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGAGGTATGGACACTTCACCCCGCTTTCATGAACTGaattc > 8:184291/1‑148 (MQ=255) cgcgGAAAAAACTGCCGTCGGCAAGGGCCAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGCAGTGACGTATGGACACGTCACCCCGCTTTCATGTGATGaattcaa > 6:268379/1‑149 (MQ=255) gcgGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGacac < 7:280418/119‑1 (MQ=255) gcgGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGAGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGacac > 8:280418/1‑119 (MQ=255) tACTGCAGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTgcg > 2:49449/1‑149 (MQ=255) cTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTgcgcg < 7:173884/149‑1 (MQ=255) tGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCtt < 8:220922/120‑1 (MQ=255) tGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCtt > 7:220922/1‑120 (MQ=255) cGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCttt < 8:70689/149‑1 (MQ=255) ggCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGt > 5:279192/1‑149 (MQ=255) gCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTg > 5:242746/1‑149 (MQ=255) cAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCCCGCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGGTTTTAGTg > 5:25313/1‑148 (MQ=255) cAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGACACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTgg < 2:179339/149‑1 (MQ=255) gggCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTg > 2:138160/1‑145 (MQ=255) gggCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTg < 1:138160/145‑1 (MQ=255) ggCGAGTTTGGCTGGCTTTGTCAAGAAGACGTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTAGGGACACGTCAGCCGGCTGTCAGGTGCTGAATTCAATTAGCTGCGCGCTTTTAGTGGacac > 8:129239/1‑149 (MQ=255) gAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGacacac > 2:308766/1‑148 (MQ=255) gTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTa > 4:247360/1‑148 (MQ=255) tATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTaaa < 4:262445/149‑1 (MQ=255) gctggctTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCt < 6:242746/148‑1 (MQ=255) gctTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTa < 1:49449/147‑1 (MQ=255) aagaagACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGa > 4:97136/1‑148 (MQ=255) aagaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAg < 5:10531/131‑1 (MQ=255) aagaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAg > 6:10531/1‑131 (MQ=255) gaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGc > 3:135611/1‑136 (MQ=255) gaCCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGc < 4:135611/136‑1 (MQ=255) ccTCCCGTAAATCAAGCATGAAAGGGCGATCTCAGGTTTCAAAAAAGCGGAGTGACGTATTGACACTTGACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgtgtg < 5:268379/149‑1 (MQ=255) cccGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattcaat < 8:160203/93‑1 (MQ=255) cccGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattcaat > 7:160203/1‑93 (MQ=255) gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgtgt < 2:22149/142‑1 (MQ=255) gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgtgt > 1:22149/1‑142 (MQ=255) gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgt < 4:234037/140‑1 (MQ=255) gTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAgt > 3:234037/1‑140 (MQ=255) aaaTCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTAc > 2:59516/1‑130 (MQ=255) aaaTCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTAc < 1:59516/130‑1 (MQ=255) aaTCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGt < 3:247360/148‑1 (MQ=255) tCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTa > 1:278397/1‑149 (MQ=255) cAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACAACGTAAAGATTTACATTAATGAAAAGTGTTTTTGCGTTATAc > 1:185973/1‑149 (MQ=255) gCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACACCGCTTTCATGTGCTGAATACAATTCGCTGCGCGC‑TTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACcgcg > 1:46945/1‑149 (MQ=255) cATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACcgcg > 5:603/1‑149 (MQ=255) gAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattc < 8:269015/74‑1 (MQ=255) gAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGaattc > 7:269015/1‑74 (MQ=255) gAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCACGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAt > 2:107757/1‑149 (MQ=255) aaaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAt < 6:279192/148‑1 (MQ=255) aaaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAt < 7:285996/148‑1 (MQ=255) aaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGAGACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAtgt > 6:27284/1‑149 (MQ=255) aaGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGATTACAGAAAAGTGTGTTTTCGGTCTACCGCGGAtgt > 2:78229/1‑149 (MQ=255) gggCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATgtgt < 7:163047/149‑1 (MQ=255) cGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTaa > 4:266264/1‑148 (MQ=255) cAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTaaa > 5:43196/1‑94 (MQ=255) cAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTaaa < 6:43196/94‑1 (MQ=255) cAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAac < 5:188620/149‑1 (MQ=255) ggTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAacac < 2:278397/149‑1 (MQ=255) aaGCGGACTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTCTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCTATGCGa < 6:25313/149‑1 (MQ=255) ggggTGACGTGTCCATACGTCACTCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGa > 1:97097/4‑119 (MQ=38) ggggTGACGTGTCCATACGTCACTCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGa < 2:97097/116‑1 (MQ=38) ggggTGACGTGTCCATACGTCACTCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGa > 8:60690/4‑149 (MQ=255) tGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGa > 2:216540/1‑149 (MQ=255) gTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCa < 5:269831/131‑1 (MQ=255) gTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCa > 6:269831/1‑131 (MQ=255) aTGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCt > 3:27575/1‑148 (MQ=255) aTGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCt < 4:27575/148‑1 (MQ=255) | CACCAACGGTCTGACCGTCGGCACCGATGGCTTCACCGCGGAAAATACTGCCGTCGGCAAGGGCGAGTATGGCTGGCTTTGTCAAGAAGACCTCCCGTAAATCAAGCATGAAAGGGCGATCGCAGGTTGCAAAAAAGCGGAGTGACGTATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCT > NC_002947/5373085‑5373380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |