| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,535,236 | C→T | 6.8% | P85S (CCC→TCC) | pncB → | nicotinate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,535,236 | 0 | C | T | 6.8% | 219.6 / 4.0 | 73 | P85S (CCC→TCC) | pncB | nicotinate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (38/30); new base T (3/2); total (41/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.47e-01 | |||||||||||
CCGACGTCGAATGGGAATTCCGCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGCCATCATCAG > NC_002947/5535090‑5535381 | ccGACGTCGAATGGGAATTCCGCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGccc < 4:39842/149‑1 (MQ=255) gAATGGGAATTCCGCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACtttt < 3:92062/148‑1 (MQ=255) gggAATTCCGCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGc > 6:174343/1‑149 (MQ=255) gAATTCCGCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCtt > 7:13139/1‑149 (MQ=255) gCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTAc < 4:17789/138‑1 (MQ=255) gCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTAc > 3:17789/1‑138 (MQ=255) cGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGAGGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGtt > 1:99186/1‑149 (MQ=255) aaCGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCg > 2:8656/1‑149 (MQ=255) aaCGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCg > 2:3587/1‑149 (MQ=255) aCGGTGAGGACCTGCGCCCCTACCTCGGCGAAGTTCGCAATCAGCTCGAACGGCTTGCCGACATCACCCTGGACGATGGCCGGCTGGCCGTCCTCGAACGCAGCAGCGTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCGGtgacgg > 4:49925/1‑144 (MQ=255) tGAGGACCTGCGCCACTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTAGCCGACCTCACCCAGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCTCCTGTTCCGCTTc > 4:215040/1‑148 (MQ=255) cTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTTCTCTGCGCCTGTTCCGCTTCAATCTGc < 1:8656/149‑1 (MQ=255) cTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTTCTCTGCGCCTGTTCCGCTTCAATCTGc < 1:3587/149‑1 (MQ=255) cTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGc < 7:185880/148‑1 (MQ=255) cTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGc > 8:185880/1‑148 (MQ=255) cTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCg > 2:270418/1‑149 (MQ=255) cgcCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGtt < 8:13139/148‑1 (MQ=255) ggCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGAGGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCgg < 2:99186/149‑1 (MQ=255) ggCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCgg > 3:305891/1‑149 (MQ=255) ggCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCg < 5:174343/148‑1 (MQ=255) gCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTgc > 5:148849/1‑111 (MQ=255) gCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTgc < 6:148849/111‑1 (MQ=255) gAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACtttt < 8:217487/97‑1 (MQ=255) gAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACtttt > 7:217487/1‑97 (MQ=255) aTTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCg > 1:68874/1‑148 (MQ=255) ttCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCgg < 5:18819/142‑1 (MQ=255) ttCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCgg > 6:18819/1‑142 (MQ=255) ttCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGa > 7:3024/1‑148 (MQ=255) cAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATg < 1:5600/149‑1 (MQ=255) tCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGACTGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGAt > 1:249669/1‑148 (MQ=255) gCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGc > 2:283845/1‑149 (MQ=255) gAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGt > 4:216385/1‑148 (MQ=255) gAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGAGCACGTCGGCATCGAAAATGATCAGCTGtt > 7:101826/1‑149 (MQ=255) ggCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGc > 1:104579/1‑108 (MQ=255) ggCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGc < 2:104579/108‑1 (MQ=255) gCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCTAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTgc < 3:216385/149‑1 (MQ=255) gCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACCCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTgc > 1:100221/1‑149 (MQ=255) aCCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTc < 8:207182/148‑1 (MQ=255) aCCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGAGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTcc < 8:101826/149‑1 (MQ=255) aCCCAGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTc < 1:270418/148‑1 (MQ=255) ccTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCGGCTGTTCCTGCGCCTGAAAGATCCGt < 3:215040/149‑1 (MQ=255) ccTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGt > 2:171745/1‑149 (MQ=255) ccTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGt < 2:68874/149‑1 (MQ=255) ccTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGt > 7:228785/1‑149 (MQ=255) cTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGaaaa > 1:32314/1‑116 (MQ=255) cTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGaaaa < 2:32314/116‑1 (MQ=255) cTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTg > 1:139538/1‑149 (MQ=255) gACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTgg < 2:139538/147‑1 (MQ=255) aCGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTg > 8:274952/1‑149 (MQ=255) cGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTg > 3:20308/1‑148 (MQ=255) cGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGc > 7:177628/1‑149 (MQ=255) gATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCa < 8:3024/149‑1 (MQ=255) ccTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGaa < 4:305891/148‑1 (MQ=255) ccTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAg > 6:84089/1‑149 (MQ=255) tCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATc < 6:240168/137‑1 (MQ=255) tCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATc > 5:240168/1‑137 (MQ=255) tCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTg > 8:48781/1‑149 (MQ=255) gAACGCATCAGCTTCCTCAAGTCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGaaa > 4:25877/1‑114 (MQ=255) gAACGCATCAGCTTCCTCAAGTCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGaaa < 3:25877/114‑1 (MQ=255) gAACGCATCAGCTTCCTCAAGTCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGaaa < 5:100472/114‑1 (MQ=255) gAACGCATCAGCTTCCTCAAGTCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGATTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGaaa > 6:100472/1‑114 (MQ=255) aaCGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCg < 7:274952/149‑1 (MQ=255) aTCAGCTTCCTCAAGTCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCgctgct > 3:51740/1‑149 (MQ=255) aTCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCgctgct > 3:137441/1‑149 (MQ=255) gCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGcc < 2:249669/149‑1 (MQ=255) ccTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATc > 6:162207/1‑80 (MQ=255) ccTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATc < 5:162207/80‑1 (MQ=255) cTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATc < 8:181303/120‑1 (MQ=255) cTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATc > 7:181303/1‑120 (MQ=255) tCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGCcatcat > 8:31579/1‑148 (MQ=255) tCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGAGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGCcatcat > 8:117747/1‑148 (MQ=255) aaGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGCCAtcatca < 7:31579/148‑1 (MQ=255) aaGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGCCAtcatca < 1:283845/148‑1 (MQ=255) aaGCCCGACTATTTAAGCTT‑ACTGCGCCTCTTCCGCTTCAATCTGCGTTACGTCCACCTCGGAATCGAAAATGATCAGCTGTTCCTCCGCAAGAAAGGACCGAGGCTGCATGTGATCCTGTTCGAACTGCCGCTCATGGCCATCATCAg > 6:289599/1‑149 (MQ=255) | CCGACGTCGAATGGGAATTCCGCTGCCGCAACGGTGAGGACCTGCGCCCCTACCTCGGCGAAATTCGCAATCAGCTCGAACGGCTTGCCGACCTCACCCTGGACGATGGCCAGCTGGCCTTCCTCGAACGCATCAGCTTCCTCAAGCCCGACTTTTTACGCTT‑TCTGCGCCTGTTCCGCTTCAATCTGCGTTACGTGCACGTCGGCATCGAAAATGATCAGCTGTTCCTGCGCCTGAAAGGTCCGTGGCTGCATGTGATCCTGTTCGAAGTGCCGCTGCTGGCCATCATCAG > NC_002947/5535090‑5535381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |