| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,582,559 | A→G | 6.6% | intergenic (+136/+31) | PP_4910 → / ← PP_4911 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,582,559 | 0 | A | G | 6.6% | 225.7 / 4.2 | 76 | intergenic (+136/+31) | PP_4910/PP_4911 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (37/34); new base G (3/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
CGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTCGG > NC_002947/5582415‑5582705 | cgcgCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGc < 7:122828/149‑1 (MQ=255) cgcCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCgg < 2:241332/149‑1 (MQ=255) aCAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCATTCGCTGCGGGCtttt > 5:90143/1‑148 (MQ=255) gTAGACGCGACATCTATAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCgg < 8:1476/139‑1 (MQ=255) gTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGt < 3:19195/149‑1 (MQ=255) gTAGACGCGACATCTAAAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCgg > 7:1476/1‑139 (MQ=255) gcgACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTgg > 5:192889/1‑149 (MQ=255) gcgACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTgg > 4:85113/1‑149 (MQ=255) gACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCATTCGCTGCGGGCTTTTTTGTATCTgccg < 6:90143/149‑4 (MQ=38) aCATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCg < 4:82978/149‑1 (MQ=255) cAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGt > 7:152778/1‑143 (MQ=255) cAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGt < 8:152778/143‑1 (MQ=255) cAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGa < 2:73852/147‑1 (MQ=255) cAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGAt < 1:63422/148‑1 (MQ=255) cAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATc < 6:141981/149‑1 (MQ=255) aTGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCa < 2:156861/144‑1 (MQ=255) aTGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCa > 1:156861/1‑144 (MQ=255) ttGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAAGTAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGAt > 1:83101/1‑148 (MQ=255) gAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAAc > 6:155446/1‑149 (MQ=255) ccAGGCTGGTGTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTc < 6:192889/149‑1 (MQ=255) cAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTcc < 3:11191/149‑1 (MQ=255) cAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTc > 6:17874/1‑148 (MQ=255) aGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCa > 1:159489/1‑149 (MQ=255) gTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTAt > 6:199596/1‑111 (MQ=255) gTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTAt < 5:199596/111‑1 (MQ=255) ccTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGc > 5:236655/1‑148 (MQ=255) ttGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGaa > 5:320824/1‑149 (MQ=255) ttGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGAGaa > 8:213367/1‑149 (MQ=255) cGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCg < 5:17874/149‑1 (MQ=255) gATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGGGGGCttt < 5:229671/94‑1 (MQ=255) gATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGAGGGCttt > 6:229671/1‑94 (MQ=255) aCCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAg > 5:315295/1‑149 (MQ=255) cctgcctgGAGAAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCACGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAgg > 6:116040/1‑149 (MQ=255) ctgcctgGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGc > 6:309011/1‑149 (MQ=255) cctgGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCAt > 2:58768/1‑149 (MQ=255) gATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTg < 6:315295/149‑1 (MQ=255) gATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTg < 7:197293/149‑1 (MQ=255) gATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCAGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTg > 8:251662/1‑149 (MQ=255) aTCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTgg < 1:58768/149‑1 (MQ=255) tCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTgg < 2:83101/148‑1 (MQ=255) cAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGtt > 8:99782/1‑149 (MQ=255) aGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGACATCGGGATTTTGGGttt > 5:96698/1‑149 (MQ=255) aa‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTcc > 5:146191/1‑149 (MQ=255) cgcAAACCCGCTCCAACGAAGACCGGCAGATACAAAAAAGCCAGCACCGAAAGCGGGCTTTGTCGTATCTGCCCGATTGATCAGAACCCATAAACTACCATATCGGAGCGAATCGTCGACGCCATCGCGATTATGGGTTTCTCCGcccc > 8:226981/1‑149 (MQ=255) gcAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAtttt < 5:182162/133‑1 (MQ=255) gcAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAtttt > 6:182162/1‑133 (MQ=255) aaaCCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGGATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCctt > 6:70240/1‑149 (MQ=255) aaCCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttc < 5:116040/149‑1 (MQ=255) cccGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttctt < 7:251662/149‑1 (MQ=255) cccGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttctt > 1:135525/1‑149 (MQ=255) cccGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttct > 4:294748/1‑148 (MQ=255) cGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGGATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCa < 5:70240/149‑1 (MQ=255) tACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAg > 6:264681/1‑149 (MQ=255) cGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCgg > 8:44754/1‑130 (MQ=255) cGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCgg < 7:44754/130‑1 (MQ=255) gAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCg < 2:159489/149‑1 (MQ=255) gAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCg > 2:213357/1‑149 (MQ=255) gACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTg < 7:99782/149‑1 (MQ=255) ccGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCa < 6:236655/149‑1 (MQ=255) ggccAGATACGACAAAGCCCGCATTCGCTGCGGGCTTTTTTGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAg > 4:270008/4‑149 (MQ=37) gCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCg > 3:123083/1‑149 (MQ=255) gATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGc < 5:309011/149‑1 (MQ=255) aTACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCt > 5:292794/1‑149 (MQ=255) aCAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCTTCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCttt > 5:251663/1‑149 (MQ=255) aaaaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCa > 1:118084/1‑138 (MQ=255) aaaaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCa < 2:118084/138‑1 (MQ=255) aaaaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCttttt > 2:270081/1‑149 (MQ=255) aaaaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCttttt > 3:224988/1‑149 (MQ=255) aaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGTGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCg < 7:213367/149‑1 (MQ=255) aaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCg < 6:146191/149‑1 (MQ=255) aaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCgg < 5:264681/149‑1 (MQ=255) aaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGt < 5:155446/149‑1 (MQ=255) gCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGc < 3:85113/149‑1 (MQ=255) ggtgCGAATGCGGGCTTTGTCGTATGTGGCCTTTTGATCTGAAGGGATATACTTCCATTTCGGTGCGAATAGGAGAGGCCATGTGGATTTTGGGTTTCTGAGGAGCCTTCTTATCCTGAGTCGGTGAAGGGGGCTATTTAGGTGcgtat > 3:162172/4‑145 (MQ=255) gCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCAATATCGGTGCTAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCAGGCCCCTTCTTCAACTGAGTCGGTGCATCGGGCTTTTTCGGTTCctct > 3:162169/1‑149 (MQ=255) cGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTCgg < 2:135525/149‑1 (MQ=255) | CGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAA‑TAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTCGG > NC_002947/5582415‑5582705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |